RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR51Q1Q8NH59 317 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 DOK4Q8TEW6 326 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 C2orf15Q8WU43 125 aaKnown RBP1.69□□□□□ -2.14
VPS41-207ENST00000439468 OR5P2Q8WZ92 322 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 OTUB2Q96DC9 234 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 TVP23CQ96ET8 276 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 MSANTD3Q96H12 275 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 XKR8Q9H6D3 395 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 ZNF586Q9NXT0 402 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 MRM2Q9UI43 246 aaKnown RBP1.69□□□□□ -2.14
VPS41-207ENST00000439468 GREB1Q4ZG55 1949 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CACNA1DQ01668 2161 aa1.69□□□□□ -2.14
VPS41-207ENST00000439468 CUBNO60494 3623 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 FLNCQ14315 2725 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SYNRGQ9UMZ2 1314 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 IGKV3D-11A0A0A0MRZ8 115 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 A8MWP4 228 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 H3BQ85 93 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 J3QKU1 62 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 K7EPK0 472 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SPOPO43791 374 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SOD3P08294 240 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SNRPAP09012 282 aaKnown RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 CGB3P0DN86 165 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 CGB7P0DN87 165 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 RPS12P25398 132 aaKnown RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 DNASE1L1P49184 302 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 RAB38P57729 211 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 BNIP2Q12982 314 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 VAMP3Q15836 100 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 KRTAP25-1Q3LHN0 102 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 N4BP2L1Q5TBK1 243 aaPredicted RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 ERICH5Q6P6B1 374 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 CYP4Z1Q86W10 505 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 AMN1Q8IY45 258 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 ST13P4Q8IZP2 240 aaPredicted RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 ZNF664Q8N3J9 261 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 TRIML2Q8N7C3 387 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 OR2M3Q8NG83 312 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 MAL2Q969L2 176 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 ZMYND19Q96E35 227 aaPredicted RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 ZBED3Q96IU2 234 aaPredicted RBP1.68□□□□□ -2.14
VPS41-207ENST00000439468 ANAPC13Q9BS18 74 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SLC25A31Q9H0C2 315 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 TAS2R13Q9NYV9 303 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 ENPP5Q9UJA9 477 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 SLC22A14Q9Y267 594 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 TANC1Q9C0D5 1861 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 MYO16Q9Y6X6 1858 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 DYSFO75923 2080 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 CSMD2Q7Z408 3487 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 LAMA1P25391 3075 aa1.68□□□□□ -2.14
VPS41-207ENST00000439468 F8P00451 2351 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 NUP205Q92621 2012 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 MUC22E2RYF6 1773 aaPredicted RBP1.67□□□□□ -2.14
VPS41-207ENST00000439468 COL6A6A6NMZ7 2263 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 A0A0B4J2C4 111 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 ZNF729A6NN14 1252 aaPredicted RBP1.67□□□□□ -2.14
VPS41-207ENST00000439468 M0QXV9 152 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 MYO1DO94832 1006 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 IVLP07476 585 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 IL12BP29460 328 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 LGALS7P47929 136 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 NUDT2P50583 147 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 PLTPP55058 493 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 RAB25P57735 213 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 STX3Q13277 289 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 BIKQ13323 160 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 ENDOGQ14249 297 aaKnown RBP1.67□□□□□ -2.14
VPS41-207ENST00000439468 TRAM1Q15629 374 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 ATP6AP1LQ52LC2 224 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 PYDC2Q56P42 97 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 CLEC12AQ5QGZ9 265 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 GLYATQ6IB77 296 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 CYHR1Q6ZMK1 362 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 TWIST2Q8WVJ9 160 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 NELFBQ8WX92 580 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 OPTNQ96CV9 577 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 IGF2BP2-AS1Q96M15 143 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 YPEL4Q96NS1 127 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 CATSPER2Q96P56 530 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 TSSK6Q9BXA6 273 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 FBXL15Q9H469 300 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 DUSP21Q9H596 190 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 WDR55Q9H6Y2 383 aaPredicted RBP1.67□□□□□ -2.14
VPS41-207ENST00000439468 DNAJC27Q9NZQ0 273 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 ZNF230Q9UIE0 474 aaPredicted RBP1.67□□□□□ -2.14
VPS41-207ENST00000439468 BTRCQ9Y297 605 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 KIF20BQ96Q89 1820 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 BSNQ9UPA5 3926 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 RTL1A6NKG5 1358 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 MED13LQ71F56 2210 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 CRYBG3Q68DQ2 2970 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 PTPRQQ9UMZ3 2332 aa1.67□□□□□ -2.14
VPS41-207ENST00000439468 AKAP9Q99996 3911 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 SPEF2Q9C093 1822 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 ATRQ13535 2644 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 TRAV8-3A0A0A6YYJ7 113 aa1.66□□□□□ -2.14
VPS41-207ENST00000439468 MYBPHLA2RUH7 354 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms