RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 CREB3L1Q96BA8 519 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 MOB3AQ96BX8 217 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 KCNS2Q9ULS6 477 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 PSG11Q9UQ72 335 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 AMMECR1Q9Y4X0 333 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-202ENST00000439369 ABCA2Q9BZC7 2435 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 YLPM1P49750 1951 aaKnown RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 J3QR06 171 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 TOR1AO14656 332 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 IGLV1-47P01700 117 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 AADACP22760 399 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 NFYAP23511 347 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 LUMP51884 338 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 KRTAP1-1Q07627 177 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 MIDNQ504T8 468 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 PLA1AQ53H76 456 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF626Q68DY1 528 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 FAHD2BQ6P2I3 314 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 C5orf24Q7Z6I8 188 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 FAHD2AQ96GK7 314 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 SLC25A21Q9BQT8 299 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 AGMATQ9BSE5 352 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF2Q9BSG1 426 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 PCGF1Q9BSM1 259 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 ABHD14AQ9BUJ0 271 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 C11orf54Q9H0W9 315 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-202ENST00000439369 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 MCUBQ9NWR8 336 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 COPZ2Q9P299 210 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 TBC1D24Q9ULP9 559 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 GAB2Q9UQC2 676 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
SCLT1-202ENST00000439369 ODF3BA8MYP8 253 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 RNASEK-C17orf49H0YIS7 233 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 CD99P14209 185 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 IL3RAP26951 378 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF137PP52743 207 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 RBMS2Q15434 407 aaKnown RBP10.34□□□□□ -0.75
SCLT1-202ENST00000439369 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 MINOS1Q5TGZ0 78 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 AADACL3Q5VUY0 350 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 HCP5Q6MZN7 132 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 FAM71F2Q6NXP2 309 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 OR51S1Q8NGJ8 323 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 MMP28Q9H239 520 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 PIPOXQ9P0Z9 390 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 TBL2Q9Y4P3 447 aaKnown RBP10.34□□□□□ -0.75
SCLT1-202ENST00000439369 MINOS1-NBL1R4GNA1 71 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 CSMD2Q7Z408 3487 aa10.34□□□□□ -0.75
SCLT1-202ENST00000439369 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■■□ 24.1
SCLT1-202ENST00000439369 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 KIAA2026Q5HYC2 2103 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 LINC00854A0A1B0GVQ3 168 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 OOSP1A8MZH6 123 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 RAB29O14966 203 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 FSHBP01225 129 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 IGHV1-69P01742 117 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 OR8U9P0C7N5 309 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 COX7A1P24310 79 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 SLC6A1P30531 599 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 CEACAM3P40198 252 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 SCGB2B2Q4G0G5 96 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 FAAP20Q6NZ36 180 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 IDO2Q6ZQW0 420 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 SLC38A6Q8IZM9 456 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 PNKDQ8N490 385 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 POC5Q8NA72 575 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 ZBTB34Q8NCN2 500 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 OR10X1Q8NGY0 326 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 OR8U1Q8NH10 309 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 ZFAND1Q8TCF1 268 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 LHX4Q969G2 390 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF486Q96H40 463 aaPredicted RBP10.33□□□□□ -0.76
SCLT1-202ENST00000439369 AKR1E2Q96JD6 320 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
SCLT1-202ENST00000439369 FXYD6Q9H0Q3 95 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF221Q9UK13 617 aa10.33□□□□□ -0.76
SCLT1-202ENST00000439369 RBM7Q9Y580 266 aaKnown RBP10.33□□□□□ -0.76
SCLT1-202ENST00000439369 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 CENPVL3A0A0U1RRI6 287 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 TXNL1O43396 289 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 NDUFB6O95139 128 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 PTTG1O95997 202 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 HTR1DP28221 377 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 S100GP29377 79 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 BTCP35070 178 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms