RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 UNKLQ9H9P5 680 aaKnown RBP16.95■□□□□ 0.3
CHD3-204ENST00000439235 OR5H14A6NHG9 310 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 PGAM2P15259 253 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 UCP3P55916 312 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 PAX8Q06710 450 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 NCR3LG1Q68D85 454 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 FAM53AQ6NSI3 398 aaPredicted RBP16.94■□□□□ 0.3
CHD3-204ENST00000439235 LPCAT3Q6P1A2 487 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 VMO1Q7Z5L0 202 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 C8orf31Q8N9H6 132 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 MINDY2Q8NBR6 621 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 DUSP18Q8NEJ0 188 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 OR9G1Q8NH87 305 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 MSI2Q96DH6 328 aaKnown RBP16.94■□□□□ 0.3
CHD3-204ENST00000439235 ABHD14AQ9BUJ0 271 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 PARP12Q9H0J9 701 aaKnown RBP16.94■□□□□ 0.3
CHD3-204ENST00000439235 OCEL1Q9H607 264 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 HEXA-AS1Q9H8Q6 139 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 SIRT7Q9NRC8 400 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 HIF1ANQ9NWT6 349 aa16.94■□□□□ 0.3
CHD3-204ENST00000439235 TCRBP04435 133 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 OR8U9P0C7N5 309 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 MMP9P14780 707 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 GNG10P50151 68 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 TRIM16LQ309B1 348 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 CYB5R2Q6BCY4 276 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 PLET1Q6UQ28 207 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 ABHD12Q8N2K0 398 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 ZDHHC22Q8N966 263 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 ZNF439Q8NDP4 499 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 OR8U1Q8NH10 309 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 SECTM1Q8WVN6 248 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 TNFRSF14Q92956 283 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 LEAP2Q969E1 77 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 CLEC7AQ9BXN2 247 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 SLC5A7Q9GZV3 580 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 PSG11Q9UQ72 335 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 NUBP2Q9Y5Y2 271 aa16.93■□□□□ 0.3
CHD3-204ENST00000439235 IGHV2-26A0A0B4J1V2 119 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 J3QLI3 93 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 TOR1AO14656 332 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 TGFAP01135 160 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 SLC25A48Q6ZT89 311 aaKnown RBP16.92■□□□□ 0.3
CHD3-204ENST00000439235 SLC38A6Q8IZM9 456 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 LINC00311Q8N616 119 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 ZFAND1Q8TCF1 268 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 MARCH1Q8TCQ1 289 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 MRGPRFQ96AM1 343 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 PCGF1Q9BSM1 259 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 C20orf85Q9H1P6 137 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 KCNS2Q9ULS6 477 aa16.92■□□□□ 0.3
CHD3-204ENST00000439235 PRRC2AP48634 2157 aaKnown RBP16.92■□□□□ 0.3
CHD3-204ENST00000439235 IGKV1D-13A0A0B4J2D9 117 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 SMAD7O15105 426 aaKnown RBP16.91■□□□□ 0.3
CHD3-204ENST00000439235 ST8SIA5O15466 376 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 SLC22A5O76082 557 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 IGHV3-7P01780 117 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 IGKV1-13P0DP09 117 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 ZNF16P17020 682 aaPredicted RBP16.91■□□□□ 0.3
CHD3-204ENST00000439235 COX7A1P24310 79 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 PRRX1P54821 245 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 OXA1LQ15070 435 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 ZNF596Q8TC21 504 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 CHPT1Q8WUD6 406 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 TBX15Q96SF7 602 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 OR2D2Q9H210 308 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 GHITMQ9H3K2 345 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 NUDT15Q9NV35 164 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 ZNF221Q9UK13 617 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 C14orf166Q9Y224 244 aaKnown RBP16.91■□□□□ 0.3
CHD3-204ENST00000439235 AUP1Q9Y679 476 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 PDZD2O15018 2839 aa16.91■□□□□ 0.3
CHD3-204ENST00000439235 J3QR06 171 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 SLC31A2O15432 143 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 HOXB4P17483 251 aaPredicted RBP16.9■□□□□ 0.3
CHD3-204ENST00000439235 IL3RAP26951 378 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 MSMO1Q15800 293 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 CT45A1Q5HYN5 189 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 UTF1Q5T230 341 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 CIARTQ8N365 385 aaPredicted RBP16.9■□□□□ 0.3
CHD3-204ENST00000439235 PNKDQ8N490 385 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 ZNF645Q8N7E2 425 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 CT45A3Q8NHU0 189 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 ZNF486Q96H40 463 aaPredicted RBP16.9■□□□□ 0.3
CHD3-204ENST00000439235 RSRP1Q9BUV0 290 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 IFI27L2Q9H2X8 130 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 VSIG4Q9Y279 399 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 KIAA2026Q5HYC2 2103 aa16.9■□□□□ 0.3
CHD3-204ENST00000439235 A0A1W2PPE3 182 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 ARPC1BO15143 372 aaKnown RBP16.89■□□□□ 0.29
CHD3-204ENST00000439235 RLN1P04808 185 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 CTSDP07339 412 aaPredicted RBP16.89■□□□□ 0.29
CHD3-204ENST00000439235 S100GP29377 79 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 GPR12P47775 334 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 ZNF134P52741 427 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 DLX1P56177 255 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 BAMBIQ13145 260 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 ABCA11PQ4W5N1 156 aa16.89■□□□□ 0.29
CHD3-204ENST00000439235 FAHD2BQ6P2I3 314 aaPredicted RBP16.89■□□□□ 0.29
CHD3-204ENST00000439235 CCBE1Q6UXH8 406 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms