RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OR5L2Q8NGL0 311 aa11.41□□□□□ -0.58
ACTN1-204ENST00000438964 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
ACTN1-204ENST00000438964 ZNF501Q96CX3 271 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-204ENST00000438964 RASL10BQ96S79 203 aa11.41□□□□□ -0.58
ACTN1-204ENST00000438964 LPAR2Q9HBW0 351 aa11.41□□□□□ -0.58
ACTN1-204ENST00000438964 A0A1W2PPC4 97 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 CD300LBA8K4G0 201 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 UCP1P25874 307 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 HOXA4Q00056 320 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-204ENST00000438964 TFF3Q07654 80 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 RNF150Q9ULK6 438 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 MED12LQ86YW9 2145 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 NAPSAO96009 420 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 CBLN1P23435 193 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 F2RP25116 425 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 PRR31Q5SQ13 230 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 C1orf194Q5T5A4 169 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 RNF114Q9Y508 228 aa11.4□□□□□ -0.58
ACTN1-204ENST00000438964 EXPH5Q8NEV8 1989 aa11.4□□□□□ -0.59
ACTN1-204ENST00000438964 A0A096LPE4 126 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 A0A1W2PPZ6 126 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 SIRPB1O00241 398 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 SYNGR1O43759 233 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 TUSC2O75896 110 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 LINC00205P59089 165 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 SRPXP78539 464 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 NFAM1Q8NET5 270 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-204ENST00000438964 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 SRXN1Q9BYN0 137 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 CTDSP1Q9GZU7 261 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 CLN8Q9UBY8 286 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 ADMP35318 185 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 ATP5G3P48201 142 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 PSMB3P49720 205 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 PSG4Q00888 419 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 ASPHD1Q5U4P2 390 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 LHFPL2Q6ZUX7 228 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 Q6ZWC4 215 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
ACTN1-204ENST00000438964 IGHV1OR21-1A0A087WYE8 117 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SIAH2O43255 324 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 IGKV1-5P01602 117 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OTX1P32242 354 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SLC38A11Q08AI6 406 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 KCNMB1Q16558 191 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 VASH2Q86V25 355 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TUBG2Q9NRH3 451 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TRAV38-1A0A0B4J264 116 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 C5orf67F2Z3F1 127 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SYNGR3O43761 229 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 IFNA1P01562 189 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 MMDQ15546 238 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 DCAF10Q5QP82 559 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 ZIC4Q8N9L1 334 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OR56B2PQ8NGI1 322 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TAF15Q92804 592 aaKnown RBP eCLIP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 WDR61Q9GZS3 305 aaKnown RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 FGF23Q9GZV9 251 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TMEM210A6NLX4 147 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 NDUFB4O95168 129 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 KRASP01116 189 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 CTSSP25774 331 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SLC35B1P78383 322 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TMEM211Q6ICI0 200 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 TIPARPQ7Z3E1 657 aaKnown RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 YRDCQ86U90 279 aaKnown RBP11.38□□□□□ -0.59
ACTN1-204ENST00000438964 C7orf61Q8IZ16 206 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 ATOH7Q8N100 152 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 C11orf42Q8N5U0 333 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 SGMS2Q8NHU3 365 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 MBD3L1Q8WWY6 194 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 OR6C1Q96RD1 312 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 DEFB126Q9BYW3 111 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
ACTN1-204ENST00000438964 A0A0J9YW62 118 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 CLEC18AA5D8T8 446 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
ACTN1-204ENST00000438964 CCL3P10147 92 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 CRYGSP22914 178 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 BRS3P32247 399 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 HIST1H3AP68431 136 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 MRPS11P82912 194 aaKnown RBP11.37□□□□□ -0.59
ACTN1-204ENST00000438964 MCEMP1Q8IX19 187 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 CLEC18CQ8NCF0 446 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 ACY3Q96HD9 319 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 FOXJ2Q9P0K8 574 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 LILRA5A6NI73 299 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 SLC17A3O00476 420 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 AQP7O14520 342 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 KRTDAPP60985 99 aa11.37□□□□□ -0.59
ACTN1-204ENST00000438964 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms