RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 OR2T10Q8NGZ9 312 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 CHRNA10Q9GZZ6 450 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 M0R2Z0 102 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 WNT9BO14905 357 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 LIMS1P48059 325 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 RNF151Q2KHN1 245 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 TMEM116Q8NCL8 245 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 TMEM37Q8WXS4 190 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 SNX22Q96L94 193 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 P2RX4Q99571 388 aa13.77□□□□□ -0.21
PTPN13-204ENST00000436978 LEUTXA8MZ59 168 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
PTPN13-204ENST00000436978 FCGR3AP08637 254 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 ELOBQ15370 118 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTPN13-204ENST00000436978 VAX1Q5SQQ9 334 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 PARP11Q9NR21 331 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 NKX2-6A6NCS4 301 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 SNRNP200O75643 2136 aaKnown RBP13.76□□□□□ -0.21
PTPN13-204ENST00000436978 ADAP1O75689 374 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 C19orf57Q0VDD7 668 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 OR8G5Q8NG78 346 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 CRISP2P16562 243 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 CISD1Q9NZ45 108 aaKnown RBP13.76□□□□□ -0.21
PTPN13-204ENST00000436978 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
PTPN13-204ENST00000436978 SPINK4O60575 86 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 FAM87AP0C7U9 286 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 FHL5Q5TD97 284 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 RABAC1Q9UI14 185 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 RIPPLY2Q5TAB7 128 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 PET117Q6UWS5 81 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 OR4A5Q8NH83 315 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 CAMPP49913 170 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 PKIBQ9C010 78 aa13.76□□□□□ -0.21
PTPN13-204ENST00000436978 CTXND1A0A1B0GTU2 59 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 C9orf172C9J069 976 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 SLC25A47Q6Q0C1 308 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 TSC2P49815 1807 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 BRWD1Q9NSI6 2320 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 TTRP02766 147 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 STPG3Q8N7X2 389 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 PRSS50Q9UI38 385 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 MPDU1O75352 247 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 HBZP02008 142 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 PPP1CCP36873 323 aaKnown RBP13.75□□□□□ -0.21
PTPN13-204ENST00000436978 CCL8P80075 99 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 EBLN2Q6P2I7 272 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 FAM222BQ8WU58 562 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 NKX2-8O15522 239 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 LOXL3P58215 753 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 PTPRDP23468 1912 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
PTPN13-204ENST00000436978 DCAF16Q9NXF7 216 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 ELOA3CA0A087WX78 387 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-204ENST00000436978 FAM74A7A6NL05 159 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 LRP11Q86VZ4 500 aa13.75□□□□□ -0.21
PTPN13-204ENST00000436978 CELA2AP08217 269 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 KLRB1Q12918 225 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 KCNK17Q96T54 332 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 PRDM14Q9GZV8 571 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 PITPNC1Q9UKF7 332 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 COX5BP10606 129 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 PRSS27Q9BQR3 290 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 CDK2AP1O14519 115 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 SMPD2O60906 423 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 NTN1O95631 604 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 MS4A10Q96PG2 267 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 TMEM255AQ5JRV8 349 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 OR10J6PQ8NGY7 276 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 LPAR2Q9HBW0 351 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 PAXXQ9BUH6 204 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 ABHD14BQ96IU4 210 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 CCL13Q99616 98 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 IL11P20809 199 aa13.74□□□□□ -0.21
PTPN13-204ENST00000436978 EPOPA6NHQ4 379 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 ROM1Q03395 351 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 DYRK2Q92630 601 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 CEACAM18A8MTB9 384 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 HYPMO75409 117 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 SCO1O75880 301 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 KLHDC2Q9Y2U9 406 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 PRR19A6NJB7 356 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 BMPR1BO00238 502 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 OR2H2O95918 312 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 MGPP08493 103 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 FAM157CP0CG43 387 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 LYZL2Q7Z4W2 148 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 PDLIM4P50479 330 aa13.73□□□□□ -0.21
PTPN13-204ENST00000436978 NAAAQ02083 359 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms