RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SNCAP37840 140 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF585BQ52M93 769 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 TMEM182Q6ZP80 229 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-203ENST00000435201 FAM57AQ8TBR7 257 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 GNPNAT1Q96EK6 184 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-203ENST00000435201 SEBOXQ9HB31 216 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-203ENST00000435201 FAM74A7A6NL05 159 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 K7N7A8 449 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 DFFBO76075 338 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 CST7O76096 145 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 IGKV1-5P01602 117 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 ATP6V0CP27449 155 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 CEACAM8P31997 349 aaPredicted RBP14.02□□□□□ -0.16
LIMK1-203ENST00000435201 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 FAM180AQ6UWF9 173 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 RPRMLQ8N4K4 120 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 LFNGQ8NES3 379 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 ATP5SQ99766 215 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 OR2D2Q9H210 308 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 DUSP13Q9UII6 198 aa14.02□□□□□ -0.16
LIMK1-203ENST00000435201 SPENQ96T58 3664 aaKnown RBP14.02□□□□□ -0.17
LIMK1-203ENST00000435201 SRRM5B3KS81 715 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 MKRN2OSH3BPM6 223 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 K7EM74 188 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 TXNL1O43396 289 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 CFHR2P36980 270 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 SULT1A1P50225 295 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 KLF3P57682 345 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-203ENST00000435201 CATR1Q13166 79 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 PEA15Q15121 130 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 Q6ZRM9 215 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 OR52L2PQ8NGH6 319 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 OR2G3Q8NGZ4 309 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 HEATR1Q9H583 2144 aaKnown RBP14.01□□□□□ -0.17
LIMK1-203ENST00000435201 ASPMQ8IZT6 3477 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 CHD3Q12873 2000 aaKnown RBP14.01□□□□□ -0.17
LIMK1-203ENST00000435201 FAM157AC9JC47 383 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 FAM90A26D6RGX4 464 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 SYNGR2O43760 224 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 PRDX2P32119 198 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 RPS23P62266 143 aaKnown RBP14.01□□□□□ -0.17
LIMK1-203ENST00000435201 NKX6-1P78426 367 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-203ENST00000435201 CD177Q8N6Q3 437 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 TMEM217Q8N7C4 229 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 TCTEX1D1Q8N7M0 179 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 COA4Q9NYJ1 87 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 METRNQ9UJH8 293 aa14.01□□□□□ -0.17
LIMK1-203ENST00000435201 GLIPR1P48060 266 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 FHITP49789 147 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
LIMK1-203ENST00000435201 EIF4EBP1Q13541 118 aaPredicted RBP14□□□□□ -0.17
LIMK1-203ENST00000435201 GUK1Q16774 197 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 MSMPQ1L6U9 139 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 ALKBH2Q6NS38 261 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 LRP11Q86VZ4 500 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 CLRN3Q8NCR9 226 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 PPP1R35Q8TAP8 253 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 FAM213BQ8TBF2 198 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 MMP24Q9Y5R2 645 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 KPTNQ9Y664 436 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 PRR14LQ5THK1 2151 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 KIAA2026Q5HYC2 2103 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 SVILO95425 2214 aa14□□□□□ -0.17
LIMK1-203ENST00000435201 TOR1AO14656 332 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 SPINT2O43291 252 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 C1QL1O75973 258 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 ADH4P08319 380 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 TAS2R30P59541 319 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 HTD2P86397 168 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 IZUMO4Q1ZYL8 232 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 ZNF295-AS1Q8N0V1 137 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 OR13A1Q8NGR1 328 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 PBDC1Q9BVG4 233 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 RNF150Q9ULK6 438 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 FRYQ5TBA9 3013 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 IGLV3-9A0A075B6K5 115 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 ZNF737O75373 536 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 TFF1P04155 84 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 EGR1P18146 543 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 DHRS7BQ6IAN0 325 aaPredicted RBP13.99□□□□□ -0.17
LIMK1-203ENST00000435201 FGFRL1Q8N441 504 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 FAM216AQ8WUB2 273 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 OR2V2Q96R30 315 aa13.99□□□□□ -0.17
LIMK1-203ENST00000435201 A0A1B0GW64 132 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 IFNA5P01569 189 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 SSTR5P35346 364 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 PPP1CCP36873 323 aaKnown RBP13.98□□□□□ -0.17
LIMK1-203ENST00000435201 MEGF10Q96KG7 1140 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 SNX22Q96L94 193 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 PSENENQ9NZ42 101 aa13.98□□□□□ -0.17
LIMK1-203ENST00000435201 IGKV1D-17A0A075B6S4 117 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 BTBD17A6NE02 478 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 C9JQL5 133 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 H3BP45 60 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 C15orf65H3BRN8 121 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 DPPA3Q6W0C5 159 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 ZNF66Q6ZN08 573 aa13.97□□□□□ -0.17
LIMK1-203ENST00000435201 ZNF808Q8N4W9 903 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms