RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 YPEL1O60688 119 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.41
TREX1-201ENST00000433541 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
TREX1-201ENST00000433541 CD24P25063 80 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 CEACAM6P40199 344 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 RAB7AP51149 207 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 SPCS2Q15005 226 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 ZNF260Q3ZCT1 412 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 Q3ZCU0 254 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
TREX1-201ENST00000433541 C12orf54Q6X4T0 127 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
TREX1-201ENST00000433541 OR4A4PQ8NGN8 299 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 TAF15Q92804 592 aaKnown RBP eCLIP12.52□□□□□ -0.41
TREX1-201ENST00000433541 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
TREX1-201ENST00000433541 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.41
TREX1-201ENST00000433541 HPGDSO60760 199 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 EIF4EP06730 217 aaKnown RBP12.51□□□□□ -0.41
TREX1-201ENST00000433541 DTYMKP23919 212 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 LINC00311Q8N616 119 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 OR56B4Q8NH76 319 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 OR10J5Q8NHC4 309 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 IFT46Q9NQC8 304 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
TREX1-201ENST00000433541 MRPS7Q9Y2R9 242 aaKnown RBP12.51□□□□□ -0.41
TREX1-201ENST00000433541 RBM7Q9Y580 266 aaKnown RBP12.51□□□□□ -0.41
TREX1-201ENST00000433541 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 TIMM23O14925 209 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 XRCC3O43542 346 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 FCER2P06734 321 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 HKR1P10072 659 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 RAG2P55895 527 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 ARPC4P59998 168 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
TREX1-201ENST00000433541 FOXL1Q12952 345 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 DRAM1Q8N682 238 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
TREX1-201ENST00000433541 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 MEIS3P1A6NDR6 274 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 H3BMQ9 156 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 APOA1P02647 267 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 PTHLHP12272 177 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 DYNLT3P51808 116 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 ZNF134P52741 427 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 TAS2R20P59543 309 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 OR4F5Q8NH21 305 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 AKR1E2Q96JD6 320 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 AUNIPQ9H7T9 357 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 C1RLQ9NZP8 487 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 ZNF221Q9UK13 617 aa12.49□□□□□ -0.41
TREX1-201ENST00000433541 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 A0A1W2PPI3 338 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 TXNL1O43396 289 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
TREX1-201ENST00000433541 ELK1P19419 428 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 ZNF816Q0VGE8 651 aaPredicted RBP12.48□□□□□ -0.41
TREX1-201ENST00000433541 HNF4GQ14541 408 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
TREX1-201ENST00000433541 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 S1PR3Q99500 378 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 NPFFR1Q9GZQ6 430 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 C6orf62Q9GZU0 229 aaPredicted RBP12.48□□□□□ -0.41
TREX1-201ENST00000433541 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 ADAM30Q9UKF2 790 aa12.48□□□□□ -0.41
TREX1-201ENST00000433541 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 A6NDX4 124 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 RAB29O14966 203 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 SSX5O60225 188 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 IGKV1D-33P01593 117 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 IGKV1-33P01594 117 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
TREX1-201ENST00000433541 TMEM11P17152 192 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 MDKP21741 143 aaPredicted RBP12.47□□□□□ -0.41
TREX1-201ENST00000433541 CBX5P45973 191 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 GPR12P47775 334 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms