RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NPPAP01160 153 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 SNRPAP09012 282 aaKnown RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 IL12BP29460 328 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 CASQ1P31415 396 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 HTR2BP41595 481 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 MAGEA3P43357 314 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 GCLMP48507 274 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 CD151P48509 253 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC18A1P54219 525 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 DSTNP60981 165 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TSPAN5P62079 268 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 BTN1A1Q13410 526 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 USF2Q15853 346 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 GLYATQ6IB77 296 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC25A34Q6PIV7 304 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 XKRXQ6PP77 449 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TBPL2Q6SJ96 375 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 FAM231DQ6ZW35 169 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 C17orf78Q8N4C9 275 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 RNF182Q8N6D2 247 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCNYL1Q8N7R7 359 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZFP62Q8NB50 900 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 ERMNQ8TAM6 284 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 PDCD6IPQ8WUM4 868 aaKnown RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 SMIM8Q96KF7 97 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF396Q96N95 335 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 GPR82Q96P67 336 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 HBEGFQ99075 208 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 DDA1Q9BW61 102 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TSGA10Q9BZW7 698 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 METTL8Q9H825 291 aaKnown RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TREM1Q9NP99 234 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 MRPL40Q9NQ50 206 aaKnown RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 PARP11Q9NR21 331 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 RBM22Q9NW64 420 aaKnown RBP eCLIP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 RBM12B-AS1Q9P1G2 102 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 BOD1L1Q8NFC6 3051 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 YLPM1P49750 1951 aaKnown RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 LCTP09848 1927 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 MYH8P13535 1937 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 ICE1Q9Y2F5 2266 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TLN1Q9Y490 2541 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ATG2BQ96BY7 2078 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ADGRG4Q8IZF6 3080 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SEC16AO15027 2179 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SHANK1Q9Y566 2161 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A1B0GX12 115 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF98A6NK75 572 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CLDN34H7C241 214 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 K7EPK0 472 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 PIRO00625 290 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 GYG2O15488 501 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 AQP9O43315 295 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 COCHO43405 550 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SGCEO43556 437 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC37A4O43826 429 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR5AC1P0C628 307 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CECR9P0C854 216 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC35E2BP0CK96 405 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CTSEP14091 401 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 TAC1P20366 129 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 RANBP1P43487 201 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 TTPAP49638 278 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2B6P58173 313 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR10A3P58181 314 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CD164Q04900 197 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ATP5G2Q06055 141 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLAMF1Q13291 335 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF235Q14590 738 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ELOCQ15369 112 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CST6Q15828 149 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 MRPL2Q5T653 305 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 THOC7Q6I9Y2 204 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPINT4Q6UDR6 99 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SSX6Q7RTT6 188 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 LRRC8AQ8IWT6 810 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 TCAIMQ8N3R3 496 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ACBD4Q8NC06 268 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ST6GALNAC3Q8NDV1 305 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR4K17Q8NGC6 315 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2AE1Q8NHA4 323 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 DDI1Q8WTU0 396 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCDC124Q96CT7 223 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMA16Q96EY4 203 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 SERPINB11Q96P15 392 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 DERL3Q96Q80 235 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 COPS4Q9BT78 406 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 TIPINQ9BVW5 301 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 MRPL20Q9BYC9 149 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ING2Q9H160 280 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 XPNPEP1Q9NQW7 623 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 STX18Q9P2W9 335 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 RWDD2AQ9UIY3 292 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ENPP5Q9UJA9 477 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 RAB22AQ9UL26 194 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 FADS3Q9Y5Q0 445 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 INSIG2Q9Y5U4 225 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 USH1CQ9Y6N9 552 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms