RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ASCL1P50553 236 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 VAMP2P63027 116 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 FAM53AQ6NSI3 398 aaPredicted RBP11.68□□□□□ -0.54
HOXC4-202ENST00000430889 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
HOXC4-202ENST00000430889 GALMQ96C23 342 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 LUZP4Q9P127 313 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 BSNQ9UPA5 3926 aa11.68□□□□□ -0.54
HOXC4-202ENST00000430889 RIF1Q5UIP0 2472 aaKnown RBP11.67□□□□□ -0.54
HOXC4-202ENST00000430889 DSCAML1Q8TD84 2053 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 F8W036 122 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 TXNL1O43396 289 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 EPHA1P21709 976 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 GLIPR1P48060 266 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 FHITP49789 147 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 DYNLT3P51808 116 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 TDGF1P3P51864 188 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
HOXC4-202ENST00000430889 IZUMO4Q1ZYL8 232 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 CR1LQ2VPA4 569 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 HSD17B11Q8NBQ5 300 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 OR13A1Q8NGR1 328 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 RAB40CQ96S21 281 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 KCNS2Q9ULS6 477 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
HOXC4-202ENST00000430889 RNF212BA8MTL3 300 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 M0R1B8 84 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 C1QL1O75973 258 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 LHBP01229 141 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 H2AFB1P0C5Y9 115 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 BRWD1-AS2P59051 145 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 CLINT1Q14677 625 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 SWI5Q1ZZU3 235 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 MIDNQ504T8 468 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 SPRNQ5BIV9 151 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 GCSAMQ8N6F7 178 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 USF3Q68DE3 2245 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 CADP27708 2225 aa11.66□□□□□ -0.54
HOXC4-202ENST00000430889 CEP250Q9BV73 2442 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 A8MXE2 369 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 NXPH3O95157 252 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 OMGP23515 440 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 IL2RGP31785 369 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 PRDX2P32119 198 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 CCKARP32238 428 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 GABRA2P47869 451 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 RPL30P62888 115 aaKnown RBP11.65□□□□□ -0.54
HOXC4-202ENST00000430889 C22orf34Q6ZV56 151 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 ATP5SQ99766 215 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.54
HOXC4-202ENST00000430889 DSCAMO60469 2012 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 MGAQ8IWI9 3026 aa11.65□□□□□ -0.54
HOXC4-202ENST00000430889 A0A1B0GW64 132 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 WRBO00258 174 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 TSPAN4O14817 238 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 NUPL2O15504 423 aaKnown RBP11.65□□□□□ -0.55
HOXC4-202ENST00000430889 CST7O76096 145 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 SFTA3P0C7M3 94 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 CD80P33681 288 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 SSTR5P35346 364 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 GATA4P43694 442 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 NPBWR1P48145 328 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 CAMLGP49069 296 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 SULT1A1P50225 295 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.55
HOXC4-202ENST00000430889 HTD2P86397 168 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 CACNA1DQ01668 2161 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.55
HOXC4-202ENST00000430889 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.55
HOXC4-202ENST00000430889 BOD1L1Q8NFC6 3051 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 ZFHX2Q9C0A1 2572 aaPredicted RBP11.64□□□□□ -0.55
HOXC4-202ENST00000430889 UMAD1C9J7I0 102 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 MKRN2OSH3BPM6 223 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 AGPAT2O15120 278 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 SYNGR2O43760 224 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 TSPAN15O95858 294 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 F12P00748 615 aaPredicted RBP11.64□□□□□ -0.55
HOXC4-202ENST00000430889 CRYAAP02489 173 aa11.64□□□□□ -0.55
HOXC4-202ENST00000430889 PPP1CCP36873 323 aaKnown RBP11.64□□□□□ -0.55
HOXC4-202ENST00000430889 TAS2R30P59541 319 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms