RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF286AQ9HBT8 521 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 Q9N2K0 584 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 TCF19Q9Y242 345 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 PRKDCP78527 4128 aaKnown RBP13.6□□□□□ -0.23
UBE3D-204ENST00000430071 A0A087X0M5 115 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 A0A1B0GX30 115 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 M0QZ24 198 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 SPINT2O43291 252 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 CD24P25063 80 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 CD34P28906 385 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 LOXL3P58215 753 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 TAS2R20P59543 309 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 OR52W1Q6IF63 320 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 MOB1BQ7L9L4 216 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 KLHDC1Q8N7A1 406 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 OR4P4Q8NGL7 312 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-204ENST00000430071 MAFIPQ8WZ33 124 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 NXF2Q9GZY0 626 aaKnown RBP13.59□□□□□ -0.23
UBE3D-204ENST00000430071 KCNIP1Q9NZI2 227 aa13.59□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF230Q9UIE0 474 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-204ENST00000430071 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.23
UBE3D-204ENST00000430071 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 GNG2P59768 71 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 HLA-DRB3P79483 266 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 MRPS15P82914 257 aaKnown RBP13.58□□□□□ -0.23
UBE3D-204ENST00000430071 MADCAM1Q13477 382 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 PNLIPRP3Q17RR3 467 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 LYG1Q8N1E2 194 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 ABHD12Q8N2K0 398 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 CLEC7AQ9BXN2 247 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 SERTAD4Q9NUC0 356 aa13.58□□□□□ -0.23
UBE3D-204ENST00000430071 A6NHS1 94 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 RGS5O15539 181 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 HLA-DQB1P01920 261 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 SCTP09683 121 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 DTYMKP23919 212 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 TALDO1P37837 337 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 BLCAPP62952 87 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 GNMTQ14749 295 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 OR52M1Q8NGK5 317 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 MCFD2Q8NI22 146 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 MMP27Q9H306 513 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 GFOD1Q9NXC2 390 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
UBE3D-204ENST00000430071 IGKV1D-8A0A087WSZ0 117 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 IGLV1-47P01700 117 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 VSIG10L2P0DP72 767 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 MNDAP41218 407 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 PITPNAQ00169 270 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 HERPUD1Q15011 391 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 TMEM95Q3KNT9 176 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 C1QL4Q86Z23 238 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 OR52L2PQ8NGH6 319 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 OR10V1Q8NGI7 309 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 OR2T6Q8NHC8 308 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 NPFFR1Q9GZQ6 430 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 C6orf62Q9GZU0 229 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-204ENST00000430071 RANBP3Q9H6Z4 567 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-204ENST00000430071 RAB9BQ9NP90 201 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 ABCB10Q9NRK6 738 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 MGAT4AQ9UM21 535 aa13.57□□□□□ -0.24
UBE3D-204ENST00000430071 IGKV1-6A0A0C4DH72 117 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 TRDCB7Z8K6 153 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 GNG10P50151 68 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 HTD2P86397 168 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 TMEM30BQ3MIR4 351 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 MINOS1Q5TGZ0 78 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 IL1F10Q8WWZ1 152 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 CFHR4Q92496 578 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 GALMQ96C23 342 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 RAB18Q9NP72 206 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 GNG12Q9UBI6 72 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 EXTL2Q9UBQ6 330 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 MRPS7Q9Y2R9 242 aaKnown RBP13.56□□□□□ -0.24
UBE3D-204ENST00000430071 MINOS1-NBL1R4GNA1 71 aa13.56□□□□□ -0.24
UBE3D-204ENST00000430071 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 J3QR06 171 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 FABP7O15540 132 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 GSTT2P0CG29 244 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 HTR1DP28221 377 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 PPP1CCP36873 323 aaKnown RBP13.55□□□□□ -0.24
UBE3D-204ENST00000430071 DYNLT3P51808 116 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 SRSF7Q16629 238 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBE3D-204ENST00000430071 CNIH2Q6PI25 160 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 Q6ZS49 121 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 Q8N2B8 174 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 GVQW1Q8N7I0 195 aa13.55□□□□□ -0.24
UBE3D-204ENST00000430071 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms