RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 SERF2P84101 59 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 LRRC75BQ2VPJ9 315 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 TMEM41BQ5BJD5 291 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF880Q6PDB4 577 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 MRGPRGQ86SM5 289 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 SNX22Q96L94 193 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 PPP1R3CQ9UQK1 317 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 LAMA5O15230 3695 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 LRP5LA4QPB2 252 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF503-AS2A6NEH8 195 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 NTN3O00634 580 aaPredicted RBP12.75□□□□□ -0.37
LINC00839-202ENST00000429940 DEGS1O15121 323 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 IFNA1P01562 189 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 DUSP3P51452 185 aaPredicted RBP12.75□□□□□ -0.37
LINC00839-202ENST00000429940 SRYQ05066 204 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 PPP1R32Q7Z5V6 425 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 OR5P3Q8WZ94 311 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
LINC00839-202ENST00000429940 CTDSP1Q9GZU7 261 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 TMEM9BQ9NQ34 198 aa12.75□□□□□ -0.37
LINC00839-202ENST00000429940 MRPS18CQ9Y3D5 142 aaKnown RBP12.75□□□□□ -0.37
LINC00839-202ENST00000429940 TNRC6AQ8NDV7 1962 aaKnown RBP12.75□□□□□ -0.37
LINC00839-202ENST00000429940 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 MAP1LC3B2A6NCE7 125 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 PHOX2AO14813 284 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 WNT2P09544 360 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 COX5BP10606 129 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 FOXG1P55316 489 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 CD81P60033 236 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 ACSF3Q4G176 576 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 MAP1LC3BQ9GZQ8 125 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 RBKSQ9H477 322 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 SS18L1O75177 396 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 IGLV2-14P01704 120 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 MDKP21741 143 aaPredicted RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 CLN3Q13286 438 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 TRA2AQ13595 282 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF573Q86YE8 665 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 PRR18Q8N4B5 295 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 C14orf144Q96I85 54 aa12.74□□□□□ -0.37
LINC00839-202ENST00000429940 WDR61Q9GZS3 305 aaKnown RBP12.74□□□□□ -0.37
LINC00839-202ENST00000429940 ARGFXA6NJG6 315 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 ANKRD30BLA7E2S9 258 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 ACP1P24666 158 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 CYB561P49447 251 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 SPANXN5Q5MJ07 72 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
LINC00839-202ENST00000429940 TUSC5Q8IXB3 177 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 PINX1Q96BK5 328 aaKnown RBP12.73□□□□□ -0.37
LINC00839-202ENST00000429940 HIST1H2BLQ99880 126 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 CDH20Q9HBT6 801 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
LINC00839-202ENST00000429940 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 CEP250Q9BV73 2442 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 SMCO3A2RU48 225 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 LILRA1O75019 489 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF737O75373 536 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 IGHEP01854 428 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 PKIAP61925 76 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 TESK1Q15569 626 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 ADIRFQ15847 76 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 BEND4Q6ZU67 534 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 OR10A7Q8NGE5 316 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 LIN7CQ9NUP9 197 aaKnown RBP12.73□□□□□ -0.37
LINC00839-202ENST00000429940 NAT8Q9UHE5 227 aa12.73□□□□□ -0.37
LINC00839-202ENST00000429940 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 NPIPB11E5RHQ5 1161 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.72□□□□□ -0.37
LINC00839-202ENST00000429940 NUBP1P53384 320 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 GNG3P63215 75 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 NCR3LG1Q68D85 454 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 LHX4Q969G2 390 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 POM121L2Q96KW2 1035 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 SMIM7Q9BQ49 75 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 OR5B21A6NL26 309 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 RHBDL1O75783 438 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 OR4X1Q8NH49 305 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00839-202ENST00000429940 PARD6GQ9BYG4 376 aaPredicted RBP12.72□□□□□ -0.37
LINC00839-202ENST00000429940 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
LINC00839-202ENST00000429940 COL27A1Q8IZC6 1860 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms