RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SERPINE2P07093 398 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 BLVRBP30043 206 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 TAS2R30P59541 319 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 LCN2P80188 198 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 TGFBR3Q03167 851 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 IL11RAQ14626 422 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 LRRC75AQ8NAA5 344 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 OR51G1Q8NGK1 321 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 CPT1CQ8TCG5 803 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 TMEM56Q96MV1 263 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 KIF26AQ9ULI4 1882 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 HYPMO75409 117 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 CD55P08174 381 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 DYNLT3P51808 116 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 PNKDQ8N490 385 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 WDYHV1Q96HA8 205 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 URB1O60287 2271 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-203ENST00000428982 PLPP3O14495 311 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 APOBEC3AP31941 199 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 FLVCR1-AS1Q8TAF5 88 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 TIMM8BQ9Y5J9 83 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 HSBP1O75506 76 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 GABRA6Q16445 453 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 VAX1Q5SQQ9 334 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 SGMS2Q8NHU3 365 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 A0A087WV48 116 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 ISG15P05161 165 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 CDKN1AP38936 164 aa12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 RPS20P60866 119 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-203ENST00000428982 NDUFB8O95169 186 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 CTLA4P16410 223 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 MRPS16Q9Y3D3 137 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 HEATR5BQ9P2D3 2071 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 PDE6DO43924 150 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 TNFSF15O95150 251 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 MGST1P10620 155 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 Q56UQ5 140 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 CYP2G1PQ6ZSU1 146 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 SPTSSAQ969W0 71 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 HRKO00198 91 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 FOXS1O43638 330 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 PITX3O75364 302 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 IGLC3P0DOY3 106 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 CFPP27918 469 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 PDLIM4P50479 330 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 C6orf15Q6UXA7 325 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 MOB1BQ7L9L4 216 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 A0A1B0GUS0 222 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 DBHP09172 617 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 HIST1H1DP16402 221 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 TMEM144Q7Z5S9 345 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 OR10G4Q8NGN3 311 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 NINJ1Q92982 152 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 TBL2Q9Y4P3 447 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
SYNGAP1-203ENST00000428982 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 AADACP22760 399 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 SRPXP78539 464 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 RHBDD2Q6NTF9 364 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 ZNRF4Q8WWF5 429 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 KBTBD11O94819 623 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 P04436 131 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 MTCP1P56278 107 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 Q6ZWC4 215 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 CALHM1Q8IU99 346 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 SPACA5Q96QH8 159 aa12.47□□□□□ -0.41
SYNGAP1-203ENST00000428982 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
SYNGAP1-203ENST00000428982 ZP4Q12836 540 aa12.46□□□□□ -0.41
SYNGAP1-203ENST00000428982 RAD51DO75771 328 aa12.46□□□□□ -0.41
SYNGAP1-203ENST00000428982 VDAC3Q9Y277 283 aa12.46□□□□□ -0.41
SYNGAP1-203ENST00000428982 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 IGHV5-10-1A0A0J9YXX1 117 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 FBLL1A6NHQ2 334 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 H3BML4 177 aa12.46□□□□□ -0.42
SYNGAP1-203ENST00000428982 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms