RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 HLA-DQB1P01920 261 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 ZBTB25P24278 435 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 MADCAM1Q13477 382 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 IGSF11Q5DX21 431 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 GCDHQ92947 438 aaPredicted RBP18.02■□□□□ 0.48
PTPN18-205ENST00000428843 CABLES2Q9BTV7 478 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 EXTL2Q9UBQ6 330 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 MRPS7Q9Y2R9 242 aaKnown RBP18.02■□□□□ 0.48
PTPN18-205ENST00000428843 POMT1Q9Y6A1 747 aa18.02■□□□□ 0.48
PTPN18-205ENST00000428843 H3BUX3 64 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 HSPA12AO43301 675 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 CEACAM6P40199 344 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 DIAPH2-AS1Q14236 149 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 AANATQ16613 207 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 GVQW1Q8N7I0 195 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 MCFD2Q8NI22 146 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 TOMM40LQ969M1 308 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 RPEQ96AT9 228 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 DGCR14Q96DF8 476 aaKnown RBP18.01■□□□□ 0.47
PTPN18-205ENST00000428843 ABHD14AQ9BUJ0 271 aa18.01■□□□□ 0.47
PTPN18-205ENST00000428843 C6orf62Q9GZU0 229 aaPredicted RBP18.01■□□□□ 0.47
PTPN18-205ENST00000428843 NXF2Q9GZY0 626 aaKnown RBP18.01■□□□□ 0.47
PTPN18-205ENST00000428843 BTBD17A6NE02 478 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 VGLL3A8MV65 326 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 BET1O15155 118 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 RNASE1P07998 156 aaKnown RBP18■□□□□ 0.47
PTPN18-205ENST00000428843 FOXB2Q5VYV0 432 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 SNX29P2Q8IUI4 249 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 CHIAQ9BZP6 476 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 PARP12Q9H0J9 701 aaKnown RBP18■□□□□ 0.47
PTPN18-205ENST00000428843 ADAM30Q9UKF2 790 aa18■□□□□ 0.47
PTPN18-205ENST00000428843 MEIS3P1A6NDR6 274 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 OOSP1A8MZH6 123 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 DIRAS3O95661 229 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 IL3RAP26951 378 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 PRSS3P35030 304 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 CBX5P45973 191 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 RAB13P51153 203 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 HOGA1Q86XE5 327 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 OR2AK2Q8NG84 335 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 OR5R1Q8NH85 324 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 PIFOQ8TCI5 191 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 ST6GALNAC6Q969X2 333 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 ABCB10Q9NRK6 738 aa17.99■□□□□ 0.47
PTPN18-205ENST00000428843 TRBV6-7A0A0A0MS04 114 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 HSD17B6O14756 317 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 FCER2P06734 321 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 DYNLT3P51808 116 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 CCDC144NLQ6NUI1 221 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 C16orf87Q6PH81 154 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 CNIH2Q6PI25 160 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 LYG1Q8N1E2 194 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 BEST4Q8NFU0 473 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 OR10J5Q8NHC4 309 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 ZFAND2BQ8WV99 257 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 RDH8Q9NYR8 311 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 ANXA10Q9UJ72 324 aa17.98■□□□□ 0.47
PTPN18-205ENST00000428843 ITGB1BP1O14713 200 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 ST8SIA5O15466 376 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 REG1BP48304 166 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 RAB7AP51149 207 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 ZNF137PP52743 207 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 ZNF816Q0VGE8 651 aaPredicted RBP17.97■□□□□ 0.47
PTPN18-205ENST00000428843 LY6EQ16553 131 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 KRTAP24-1Q3LI83 254 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 ODF3L1Q8IXM7 274 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 FAM216AQ8WUB2 273 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 TOLLIPQ9H0E2 274 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 C11orf54Q9H0W9 315 aaPredicted RBP17.97■□□□□ 0.47
PTPN18-205ENST00000428843 IFI27L2Q9H2X8 130 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 IFT46Q9NQC8 304 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 VPREB3Q9UKI3 123 aa17.97■□□□□ 0.47
PTPN18-205ENST00000428843 A0A1W2PPI3 338 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 GAPDHP04406 335 aaKnown RBP17.96■□□□□ 0.47
PTPN18-205ENST00000428843 LPLP06858 475 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 ARHGDIBP52566 201 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 OR8H3Q8N146 312 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 GPX8Q8TED1 209 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 EDARADDQ8WWZ3 215 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 SNAPC3Q92966 411 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 GINS4Q9BRT9 223 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 ANAPC10Q9UM13 185 aa17.96■□□□□ 0.47
PTPN18-205ENST00000428843 TIMM23O14925 209 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 GPR137BO60478 399 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 TPPPO94811 219 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 CTXN2P0C2S0 81 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 BRS3P32247 399 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 ARPC4P59998 168 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 RTN4IP1Q8WWV3 396 aaPredicted RBP17.95■□□□□ 0.46
PTPN18-205ENST00000428843 DIRAS2Q96HU8 199 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 SCPEP1Q9HB40 452 aa17.95■□□□□ 0.46
PTPN18-205ENST00000428843 IGHV1-3A0A0C4DH29 117 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 SULT1C2O00338 296 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 LANCL1O43813 399 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 CD24P25063 80 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 KRTAP21-3Q3LHN1 58 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 H1FOOQ8IZA3 346 aaPredicted RBP17.94■□□□□ 0.46
PTPN18-205ENST00000428843 DRAM1Q8N682 238 aa17.94■□□□□ 0.46
PTPN18-205ENST00000428843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.94■□□□□ 0.46
PTPN18-205ENST00000428843 TMEM158Q8WZ71 300 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms