RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PPYP01298 95 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ZP3P21754 424 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 FGF9P31371 208 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM33P57088 247 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 MSRB3Q8IXL7 192 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 SLC22A18ASQ8N1D0 253 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 GUCD1Q96NT3 240 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 MIOXQ9UGB7 285 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 PRSS50Q9UI38 385 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CCL27Q9Y4X3 112 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM262E9PQX1 116 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 SMIM18P0DKX4 95 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 FAM209AQ5JX71 171 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 C19orf48Q6RUI8 117 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 LRRC75AQ8NAA5 344 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 TBX15Q96SF7 602 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 VAX2Q9UIW0 290 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
CTNND1-208ENST00000428599 IGKV3D-11A0A0A0MRZ8 115 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 IGKV3-11P04433 115 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 PHYHIPLQ96FC7 376 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 A0A1W2PPE3 182 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 PPP1R17O96001 155 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 CTSSP25774 331 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 GZMKP49863 264 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 LDLRAD3Q86YD5 345 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 ZCCHC14Q8WYQ9 949 aaKnown RBP7.79□□□□□ -1.16
CTNND1-208ENST00000428599 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 MED19A0JLT2 244 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-208ENST00000428599 MGST3O14880 152 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 RNF115Q9Y4L5 304 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 SIPA1L1O43166 1804 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 IFITM10A6NMD0 228 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 B4DEV8 164 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 GREM1O60565 184 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 OR2A4O95047 310 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 PSG9Q00887 426 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 LY6EQ16553 131 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 NSUN5P2Q63ZY6 315 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 FAM214BQ7L5A3 538 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 ATG4DQ86TL0 474 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-208ENST00000428599 RAB24Q969Q5 203 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 MRGPRFQ96AM1 343 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 OR2A7Q96R45 310 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 IL17BQ9UHF5 180 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 CDC42EP3Q9UKI2 254 aa7.79□□□□□ -1.16
CTNND1-208ENST00000428599 HBZP02008 142 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 BTF3P20290 206 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 PEBP1P30086 187 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 NUTF2P61970 127 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 SNRPD3P62318 126 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 MESTQ5EB52 335 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 GVQW1Q8N7I0 195 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 DDA1Q9BW61 102 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 TRAV30A0A087WSZ9 112 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 LOC389332A0A1B0GUA5 103 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 CEACAM18A8MTB9 384 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 AP4M1O00189 453 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 KLRB1Q12918 225 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 CD300LDQ6UXZ3 194 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 GALNT14Q96FL9 552 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 GPA33Q99795 319 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 RAXQ9Y2V3 346 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 ZNF815PA8K554 130 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 SUCLG1P53597 346 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 TSPO2Q5TGU0 170 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 FAM24BQ8N5W8 94 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 BVESQ8NE79 360 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 PHLDA3Q9Y5J5 127 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 UCP2P55851 309 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 MMD2Q8IY49 270 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 ABHD14BQ96IU4 210 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 UCN2Q96RP3 112 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 RAB33BQ9H082 229 aa7.78□□□□□ -1.16
CTNND1-208ENST00000428599 MRM2Q9UI43 246 aaKnown RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-208ENST00000428599 PAGE4O60829 102 aa7.77□□□□□ -1.16
CTNND1-208ENST00000428599 MFAP4P55083 255 aa7.77□□□□□ -1.16
CTNND1-208ENST00000428599 RAG2P55895 527 aa7.77□□□□□ -1.16
CTNND1-208ENST00000428599 SMUG1Q53HV7 270 aa7.77□□□□□ -1.16
CTNND1-208ENST00000428599 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.16
CTNND1-208ENST00000428599 TRIOBPQ9H2D6 2365 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 FOXH1O75593 365 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 SP9P0CG40 484 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 TNFSF10P50591 281 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-208ENST00000428599 CLEC18BQ6UXF7 455 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 WDFY1Q8IWB7 410 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 SOSTQ9BQB4 213 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM204Q9BSN7 226 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 PRSS2P07478 247 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms