RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ADH1BP00325 375 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 KITLGP21583 273 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 TLE1Q04724 770 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 PMCHL1Q16048 86 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 DEFB110Q30KQ9 67 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 SNAI3Q3KNW1 292 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 OR10J3Q5JRS4 329 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 C1orf185Q5T7R7 199 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 RAET1LQ5VY80 246 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 PRR27Q6MZM9 219 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 Q6ZPA2 131 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 KLHDC7BQ96G42 594 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
C9orf3-206ENST00000428313 CFHR5Q9BXR6 569 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 F2Z2F3 143 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 ANGPTL7O43827 346 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 PDCD6O75340 191 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 TOX4O94842 621 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 IGHG1P01857 330 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 DEFB103AP81534 67 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 ACSM6Q6P461 480 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 C19orf35Q6ZS72 473 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 OOSP2Q86WS3 158 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 BCL2L2Q92843 193 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-206ENST00000428313 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 HRASLS2Q9NWW9 162 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 IL19Q9UHD0 177 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 PDE4DIPQ5VU43 2346 aa13.72□□□□□ -0.21
C9orf3-206ENST00000428313 A0A0G2JRQ6 117 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 CDAP32320 146 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 VIPR2P41587 438 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 ARG2P78540 354 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 MALLQ13021 153 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 SRSF7Q16629 238 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■■■ 30.9
C9orf3-206ENST00000428313 MYPOPQ86VE0 399 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-206ENST00000428313 Q8NFD4 153 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OR4F17Q8NGA8 305 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 ST8SIA1Q92185 356 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 STRADBQ9C0K7 418 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 THADAQ6YHU6 1953 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 C17orf112F2Z3M2 114 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 SPRY1O43609 319 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-206ENST00000428313 ACRP10323 421 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 AMTP48728 403 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 GNB1P62873 340 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OSR2Q8N2R0 312 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 OR6C1Q96RD1 312 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 IL36GQ9NZH8 169 aa13.71□□□□□ -0.21
C9orf3-206ENST00000428313 UBE2L5PA0A1B0GUS4 154 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF891A8MT65 544 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-206ENST00000428313 IGKV3-11P04433 115 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 PSG1P11464 419 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 DRD1P21728 446 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 NTSR1P30989 418 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 OR1D5P58170 312 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF90Q03938 601 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 PLCXD2Q0VAA5 305 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 HYAL1Q12794 435 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 OR10G8Q8NGN5 311 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 GNB4Q9HAV0 340 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 KCNIP2Q9NS61 270 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 IL36BQ9NZH7 164 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 COL5A1P20908 1838 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-206ENST00000428313 LIPT2A6NK58 231 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 SLC22A20A6NK97 555 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 FCN1O00602 326 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 TUSC2O75896 110 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 S1PR2O95136 353 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 C3orf79P0CE67 100 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 NIT1Q86X76 327 aa13.7□□□□□ -0.22
C9orf3-206ENST00000428313 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
C9orf3-206ENST00000428313 PNO1Q9NRX1 252 aaKnown RBP13.7□□□□□ -0.22
C9orf3-206ENST00000428313 SIRPB1O00241 398 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
C9orf3-206ENST00000428313 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■■■□ 20.5
C9orf3-206ENST00000428313 IAPPP10997 89 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 TIMP3P35625 211 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 ARR3P36575 388 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 MFAP5Q13361 173 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 CNN3Q15417 329 aaKnown RBP13.69□□□□□ -0.22
C9orf3-206ENST00000428313 PIGYQ3MUY2 71 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 C16orf54Q6UWD8 224 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 MRPL43Q8N983 215 aaKnown RBP13.69□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF784Q8NCA9 323 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-206ENST00000428313 OR4P4Q8NGL7 312 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 GNB1LQ9BYB4 327 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 ZNF430Q9H8G1 570 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-206ENST00000428313 NPIPA2E9PIF3 369 aa13.69□□□□□ -0.22
C9orf3-206ENST00000428313 TRAF3IP2O43734 574 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms