RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PITPNAQ00169 270 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 ZNF260Q3ZCT1 412 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 CCBE1Q6UXH8 406 aaPredicted RBP20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 TMEM219Q86XT9 240 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 OR2AK2Q8NG84 335 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 OR4A4PQ8NGN8 299 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 ST6GALNAC6Q969X2 333 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 ABCG5Q9H222 651 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 DIABLOQ9NR28 239 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 SLC23A1Q9UHI7 598 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 SCOCQ9UIL1 159 aa20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 ELF5Q9UKW6 265 aaPredicted RBP20.2■□□□□ 0.82
HERPUD2-205ENST00000427455 TIMM23O14925 209 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 FABP7O15540 132 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 GAPDHP04406 335 aaKnown RBP20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 ZBTB25P24278 435 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 RORCP51449 518 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 SRSF7Q16629 238 aaKnown RBP eCLIP20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 PNLIPRP3Q17RR3 467 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 CLVS1Q8IUQ0 354 aaPredicted RBP20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 SAMD12Q8N8I0 201 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 BEX1Q9HBH7 125 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 ZNF230Q9UIE0 474 aaPredicted RBP20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 MMP24Q9Y5R2 645 aa20.19■□□□□ 0.82
HERPUD2-205ENST00000427455 TRAV18A0A075B6X5 111 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 A0A1B0GUS0 222 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 HSPA12AO43301 675 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 TXNL1O43396 289 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 LPLP06858 475 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 MDKP21741 143 aaPredicted RBP20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 GNG2P59768 71 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 Q6ZS49 121 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 Q6ZSV7 163 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 LYG1Q8N1E2 194 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 OR56B4Q8NH76 319 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 RAB2BQ8WUD1 216 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 NUDCD2Q8WVJ2 157 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 RTN4IP1Q8WWV3 396 aaPredicted RBP20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 ACOT12Q8WYK0 555 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 CFHR4Q92496 578 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 BCL7BQ9BQE9 202 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 NPFFR1Q9GZQ6 430 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 RANBP3Q9H6Z4 567 aaPredicted RBP20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 OR1A1Q9P1Q5 309 aa20.18■□□□□ 0.82
HERPUD2-205ENST00000427455 IGHV1-3A0A0C4DH29 117 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 IGKV1-6A0A0C4DH72 117 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 TSPAN9O75954 239 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 DIRAS3O95661 229 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 CD24P25063 80 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 REG1BP48304 166 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 DRAM1Q8N682 238 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 OR4C13Q8NGP0 309 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 MAFIPQ8WZ33 124 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 S100A16Q96FQ6 103 aaKnown RBP20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 CABLES2Q9BTV7 478 aa20.17■□□□□ 0.82
HERPUD2-205ENST00000427455 FAM90A9PA6NNJ1 464 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 ITGB1BP1O14713 200 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 FAM106CPP0CH98 169 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 TMBIM6P55061 237 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 HABP2Q14520 560 aaPredicted RBP20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 HERPUD1Q15011 391 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 C16orf82Q7Z2V1 217 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 THNSL2Q86YJ6 484 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 TGIF2LXQ8IUE1 241 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 IZUMO1Q8IYV9 350 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 CAPSLQ8WWF8 208 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 EDARADDQ8WWZ3 215 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 AP3S1Q92572 193 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 IFI27L2Q9H2X8 130 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 C16orf95Q9H693 158 aa20.16■□□□□ 0.82
HERPUD2-205ENST00000427455 XRCC3O43542 346 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 LANCL1O43813 399 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 CEACAM6P40199 344 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 MOB3BQ86TA1 216 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 ODF3L1Q8IXM7 274 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 C3orf56Q8N813 242 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 AKR1E2Q96JD6 320 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 PARP12Q9H0J9 701 aaKnown RBP20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 COMMD3Q9UBI1 195 aa20.15■□□□□ 0.82
HERPUD2-205ENST00000427455 CLPSL1A2RUU4 121 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 ST8SIA5O15466 376 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 SSX5O60225 188 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 NOL3O60936 208 aaKnown RBP20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 SNRNP70P08621 437 aaKnown RBP20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 GSTT2P0CG29 244 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 GSTT2BP0CG30 244 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 LINC01006Q8NI28 216 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 CMTM3Q96MX0 182 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 AUNIPQ9H7T9 357 aa20.14■□□□□ 0.81
HERPUD2-205ENST00000427455 SAA2-SAA4A0A096LPE2 208 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 BET1O15155 118 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 OR2F2O95006 317 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 SAA2P0DJI9 122 aaPredicted RBP20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 ZNF182P17025 639 aaPredicted RBP20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 SPCS2Q15005 226 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 FBLN7Q53RD9 439 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 IGSF11Q5DX21 431 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 DTX3Q8N9I9 347 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 RBM14Q96PK6 669 aaKnown RBP20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 SLC25A33Q9BSK2 321 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms