RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 CRISPLD2Q9H0B8 497 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 OR51M1Q9H341 326 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 ADAP1O75689 374 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SOD3P08294 240 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 RNF133Q8WVZ7 376 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 OR5AC2Q9NZP5 309 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 FRRS1LQ9P0K9 344 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 CXCL10P02778 98 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 JKAMPQ9P055 326 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SAMD13Q5VXD3 122 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SFRP2Q96HF1 295 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 PRSS23O95084 383 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 TYMSP04818 313 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 EPHA8P29322 1005 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 DDTP30046 118 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 PRDX2P32119 198 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 GPA33Q99795 319 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 A0A0B4J293 547 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 RPS4XP62701 263 aaKnown RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 MEF2CQ06413 473 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 TEX30Q5JUR7 227 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 NTMQ9P121 344 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 KIAA1551Q9HCM1 1747 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 RELQ04864 619 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 GGTLC2Q14390 218 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 BEND2Q8NDZ0 799 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 NKX2-6A6NCS4 301 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 H7C1H1 209 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 ATG4DQ86TL0 474 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 WDR54Q9H977 334 aa12.63□□□□□ -0.39
PTPN13-203ENST00000427191 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
PTPN13-203ENST00000427191 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
PTPN13-203ENST00000427191 ADAMTSL3P82987 1691 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 DLL1O00548 723 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 NDUFA2O43678 99 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 SBK3P0C264 359 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 FCARP24071 287 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 KLRB1Q12918 225 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 ASPDHA6ND91 283 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 FSTP19883 344 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 TNFRSF12AQ9NP84 129 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 FGF5P12034 268 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 MMDQ15546 238 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 C2orf88Q9BSF0 95 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
PTPN13-203ENST00000427191 OR2Y1Q8NGV0 311 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
PTPN13-203ENST00000427191 LOC389332A0A1B0GUA5 103 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 DDB2Q92466 427 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF714Q96N38 554 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 WIPI2Q9Y4P8 454 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 DMRT1Q9Y5R6 373 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 PPM1DO15297 605 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 EDIL3O43854 480 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 FZR1Q9UM11 496 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
PTPN13-203ENST00000427191 FAM90A27PA6NNH2 459 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 PLPPR2Q96GM1 343 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 MT-CO3P00414 261 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 A0A1B0GW15 77 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
PTPN13-203ENST00000427191 B4GALNT1Q00973 533 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 HTN1P15515 57 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 ALG14Q96F25 216 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 RAX2Q96IS3 184 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 TMEM250H0YL14 139 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 TNFSF14O43557 240 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 MVDP53602 400 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 DLX6P56179 175 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
PTPN13-203ENST00000427191 C7orf66A4D0T2 115 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 TMEM196Q5HYL7 178 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 OR10S1Q8NGN2 331 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 LPAR2Q9HBW0 351 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 RARRES2Q99969 163 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
PTPN13-203ENST00000427191 CACNA1DQ01668 2161 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms