RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IGSF9BQ9UPX0 1349 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 NPATQ14207 1427 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 GRIN2BQ13224 1484 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 MYO15BQ96JP2 1530 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 TDRD15B5MCY1 1934 aaKnown RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 CAMTA1Q9Y6Y1 1673 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 DCCP43146 1447 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 A0A096LPI6 279 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 A0A1B0GUV1 79 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 FAM92AA1XBS5 289 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 C9orf170A2RU37 121 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 OR5H14A6NHG9 310 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 TMX2-CTNND1H3BSU7 103 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 J3KT08 172 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 TCF21O43680 179 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 SUPT7LO94864 414 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF432O94892 652 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 DUS4LO95620 317 aaKnown RBP2.8□□□□□ -1.96
SF3B1-205ENST00000424674 IGHV3-48P01763 117 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 HLA-DRB1P01911 266 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 IFNA4P05014 189 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 C8GP07360 202 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 OR4Q2P0C623 313 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 METTL15P1P0C7V9 234 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 UBBP0CG47 229 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 OR12D1P0DN82 309 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ORM2P19652 201 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 MP68P56378 58 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 GNG2P59768 71 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 HERVK_113P61574 105 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 MRPS10P82664 201 aaKnown RBP2.8□□□□□ -1.96
SF3B1-205ENST00000424674 CAV1Q03135 178 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 FABP9Q0Z7S8 132 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ERCC8Q13216 396 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 PRR4Q16378 134 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 PRR30Q53SZ7 412 aaPredicted RBP2.8□□□□□ -1.96
SF3B1-205ENST00000424674 TNFAIP8L3Q5GJ75 292 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 CLLU1OSQ5K130 101 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 C9orf66Q5T8R8 295 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 SBSNQ6UWP8 590 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 C2orf66Q6UXQ4 117 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 C11orf53Q8IXP5 236 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF283Q8N7M2 679 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ZIC4Q8N9L1 334 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 DCAF4L2Q8NA75 395 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 THEM6Q8WUY1 208 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 FAM151AQ8WW52 585 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 GPR82Q96P67 336 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 SMIM14Q96QK8 99 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 LYSMD1Q96S90 227 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 LXNQ9BS40 222 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 SLC25A2Q9BXI2 301 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 TBL1XR1Q9BZK7 514 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF556Q9HAH1 456 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 CCL28Q9NRJ3 127 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 MED11Q9P086 117 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 POMPQ9Y244 141 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 RBM7Q9Y580 266 aaKnown RBP2.8□□□□□ -1.96
SF3B1-205ENST00000424674 PRSS21Q9Y6M0 314 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 KIF26BQ2KJY2 2108 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 SMCHD1A6NHR9 2005 aa2.8□□□□□ -1.96
SF3B1-205ENST00000424674 BRCA1P38398 1863 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 KIAA1210Q9ULL0 1709 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 FAM135AQ9P2D6 1515 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 PPIP5K1Q6PFW1 1433 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 MIA2Q96PC5 1412 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DHX57Q6P158 1386 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TRAV36DV7A0A075B6V5 113 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 CIB4A0PJX0 185 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 OR4C45A6NMZ5 311 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF850A8MQ14 1090 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 KLLNB2CW77 178 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM250H0YL14 139 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 PEX7O00628 323 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GYG2O15488 501 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 SS18L1O75177 396 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 KBTBD11O94819 623 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DUSP14O95147 198 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 COX7A1P24310 79 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 OR10J1P30954 320 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 IL2RGP31785 369 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 G6PCP35575 357 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 VEGFCP49767 419 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TAF6P49848 677 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 RBP2P50120 134 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF140P52738 457 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 RRAS2P62070 204 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GRB2P62993 217 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 SELENOWP63302 87 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TNFAIP6P98066 277 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 BAMBIQ13145 260 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 HTR4Q13639 388 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 LY6DQ14210 128 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 RBMY1FQ15415 496 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 OR8B8Q15620 311 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GRK1Q15835 563 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms