RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 VEGFCP49767 419 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 VBP1P61758 197 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 NCS1P62166 190 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
USB1-202ENST00000423271 KHDC1LQ5JSQ8 128 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 GPR107Q5VW38 600 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 C6orf201Q7Z4U5 140 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 GPR141Q7Z602 305 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 OR4X2Q8NGF9 303 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 OR52M1Q8NGK5 317 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 OR4K15Q8NH41 348 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 SULT4A1Q9BR01 284 aa12.04□□□□□ -0.48
USB1-202ENST00000423271 TSSC4Q9Y5U2 329 aaPredicted RBP12.04□□□□□ -0.48
USB1-202ENST00000423271 IGHV1-3A0A0C4DH29 117 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 FOXI3A8MTJ6 420 aaPredicted RBP12.03□□□□□ -0.48
USB1-202ENST00000423271 PF4V1P10720 104 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
USB1-202ENST00000423271 TMEM50BP56557 158 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 MOB3BQ86TA1 216 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 LINC00311Q8N616 119 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 PHF21AQ96BD5 680 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 RBMXL1Q96E39 390 aaKnown RBP12.03□□□□□ -0.48
USB1-202ENST00000423271 NOL4LQ96MY1 436 aaPredicted RBP12.03□□□□□ -0.48
USB1-202ENST00000423271 FAAP24Q9BTP7 215 aa12.03□□□□□ -0.48
USB1-202ENST00000423271 PSMB11A5LHX3 300 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 GABARAPO95166 117 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 GAPDHP04406 335 aaKnown RBP12.02□□□□□ -0.49
USB1-202ENST00000423271 RAB6AP20340 208 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 SERPINB10P48595 397 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 GAPTQ8N292 157 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 PRR18Q8N4B5 295 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 ZNF439Q8NDP4 499 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 OR56B1Q8NGI3 324 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 OR10V1Q8NGI7 309 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 OR1L1Q8NH94 360 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 MRPL30Q8TCC3 161 aaKnown RBP12.02□□□□□ -0.49
USB1-202ENST00000423271 LGALS14Q8TCE9 139 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 LINC00527Q9UJ94 153 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 TRAPPC2LQ9UL33 140 aa12.02□□□□□ -0.49
USB1-202ENST00000423271 FGF16O43320 207 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 CA11O75493 328 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 HBZP02008 142 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 IGLL1P15814 213 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 RCC1P18754 421 aaPredicted RBP12.01□□□□□ -0.49
USB1-202ENST00000423271 CD33P20138 364 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 EBI3Q14213 229 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 CTF1Q16619 201 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 PLAC9Q5JTB6 97 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 Q6ZPA2 131 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 C5orf24Q7Z6I8 188 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 IZUMO1Q8IYV9 350 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 Q8N6K4 173 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 WFDC9Q8NEX5 89 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
USB1-202ENST00000423271 ST6GALNAC6Q969X2 333 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 PTX4Q96A99 478 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 ARHGAP5-AS1Q96IT6 56 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
USB1-202ENST00000423271 PECRQ9BY49 303 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 PLEKHJ1Q9NW61 149 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 GNG12Q9UBI6 72 aa12.01□□□□□ -0.49
USB1-202ENST00000423271 ZNF736B4DX44 427 aaPredicted RBP12□□□□□ -0.49
USB1-202ENST00000423271 SPINT2O43291 252 aa12□□□□□ -0.49
USB1-202ENST00000423271 PF4P02776 101 aa12□□□□□ -0.49
USB1-202ENST00000423271 RPL5P46777 297 aaKnown RBP12□□□□□ -0.49
USB1-202ENST00000423271 ZNF134P52741 427 aa12□□□□□ -0.49
USB1-202ENST00000423271 C6orf183Q5T699 404 aa12□□□□□ -0.49
USB1-202ENST00000423271 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
USB1-202ENST00000423271 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
USB1-202ENST00000423271 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
USB1-202ENST00000423271 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
USB1-202ENST00000423271 AURKAIP1Q9NWT8 199 aaPredicted RBP12□□□□□ -0.49
USB1-202ENST00000423271 AK3Q9UIJ7 227 aa12□□□□□ -0.49
USB1-202ENST00000423271 HSF4Q9ULV5 492 aa12□□□□□ -0.49
USB1-202ENST00000423271 METTL21EPA6NDL7 271 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 LINC01548A6NM66 108 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 SERPINE3A8MV23 424 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 RAB27BO00194 218 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 IGHG2P01859 326 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 IL3RAP26951 378 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 GNMTQ14749 295 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 Q3ZCU0 254 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
USB1-202ENST00000423271 OR10R2Q8NGX6 335 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 SLC25A46Q96AG3 418 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 RAB3CQ96E17 227 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 TAF9BQ9HBM6 251 aa11.99□□□□□ -0.49
USB1-202ENST00000423271 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms