RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 KNL1Q8NG31 2342 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 SPTBN5Q9NRC6 3674 aaKnown RBP9.36□□□□□ -0.91
LIMS1-207ENST00000422797 TRAV24A0A0B4J272 114 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 H3BP45 60 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 SLC31A2O15432 143 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 TNFSF12O43508 249 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 TRAPPC6AO75865 159 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 PGA5P0DJD9 388 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 COX5AP20674 150 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 GALR1P47211 349 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 CYB561P49447 251 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 PRSS12P56730 875 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 TAS2R60P59551 318 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 ADIRFQ15847 76 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 Q3ZCU0 254 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 WIPI1Q5MNZ9 446 aaPredicted RBP9.36□□□□□ -0.91
LIMS1-207ENST00000422797 FIP1L1Q6UN15 594 aaKnown RBP9.36□□□□□ -0.91
LIMS1-207ENST00000422797 OR51G1Q8NGK1 321 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 FAM216AQ8WUB2 273 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 TMEM18Q96B42 140 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 POM121L2Q96KW2 1035 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 SNX22Q96L94 193 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 OR4C12Q96R67 309 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 RTL8AQ9BWD3 113 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 FGF23Q9GZV9 251 aaPredicted RBP9.36□□□□□ -0.91
LIMS1-207ENST00000422797 RBKSQ9H477 322 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 AKIRIN1Q9H9L7 192 aaPredicted RBP9.36□□□□□ -0.91
LIMS1-207ENST00000422797 HSPB7Q9UBY9 170 aa9.36□□□□□ -0.91
LIMS1-207ENST00000422797 GGCTO75223 188 aaKnown RBP9.35□□□□□ -0.91
LIMS1-207ENST00000422797 IGKV1-39P01597 117 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 IGKV1-5P01602 117 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 IGKV1D-39P04432 117 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 IAPPP10997 89 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 PLA2G5P39877 138 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 TNFRSF9Q07011 255 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 CATR1Q13166 79 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 CLN3Q13286 438 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 HLA-BQ31612 363 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 ZNF497Q6ZNH5 498 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 C16orf82Q7Z2V1 217 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 HAPLN4Q86UW8 402 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 ZNF709Q8N972 641 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 ABHD3Q8WU67 409 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 NEIL1Q96FI4 390 aaPredicted RBP9.35□□□□□ -0.91
LIMS1-207ENST00000422797 FAM173AQ9BQD7 235 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 MBNL3Q9NUK0 354 aaKnown RBP9.35□□□□□ -0.91
LIMS1-207ENST00000422797 GAB2Q9UQC2 676 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 TP53TG5Q9Y2B4 290 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 WIPI2Q9Y4P8 454 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 RBM7Q9Y580 266 aaKnown RBP9.35□□□□□ -0.91
LIMS1-207ENST00000422797 MYO7BQ6PIF6 2116 aa9.35□□□□□ -0.91
LIMS1-207ENST00000422797 SYNGR1O43759 233 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 PDE6DO43924 150 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 RPL23P62829 140 aaKnown RBP9.34□□□□□ -0.91
LIMS1-207ENST00000422797 TESK1Q15569 626 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 ZNF468Q5VIY5 522 aaPredicted RBP9.34□□□□□ -0.91
LIMS1-207ENST00000422797 GFI1BQ5VTD9 330 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 Q6P435 159 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 PPP1R32Q7Z5V6 425 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
LIMS1-207ENST00000422797 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 APH1AQ96BI3 265 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 ZPBPQ9BS86 351 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 UBE2ZQ9H832 354 aaPredicted RBP9.34□□□□□ -0.91
LIMS1-207ENST00000422797 KCNIP1Q9NZI2 227 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 ABI3Q9P2A4 366 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 KCNS2Q9ULS6 477 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 ASXL3Q9C0F0 2248 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 VCANP13611 3396 aa9.34□□□□□ -0.91
LIMS1-207ENST00000422797 A0A0G2JMM0 328 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 A0A1W2PPB8 328 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 A0A1W2PRS3 328 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 XKRY2A2RUG3 117 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 KIR3DP1A8MWS1 328 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 F6UZH7 168 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 HSPB6O14558 160 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 NXPH3O95157 252 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 CLDN1O95832 211 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 AMBPP02760 352 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 RAC2P15153 192 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 CCNOP22674 350 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 ARL16Q0P5N6 197 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 SSPNQ14714 243 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 IGFBP7Q16270 282 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 GABRA6Q16445 453 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 VWC2Q2TAL6 325 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 PDZD11Q5EBL8 140 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 Q6ZRM9 215 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
LIMS1-207ENST00000422797 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 OR2T10Q8NGZ9 312 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 RDH5Q92781 318 aa9.33□□□□□ -0.92
LIMS1-207ENST00000422797 DIRC2Q96SL1 478 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms