RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CMSS1Q9BQ75 279 aaKnown RBP21.05■□□□□ 0.96
CDK9-202ENST00000421939 WNT10AQ9GZT5 417 aa21.05■□□□□ 0.96
CDK9-202ENST00000421939 WNK1Q9H4A3 2382 aa21.05■□□□□ 0.96
CDK9-202ENST00000421939 IGHV3-72A0A0B4J1Y9 119 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 GADD45AP24522 165 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 HLA-DRB3P79483 266 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 HNF4GQ14541 408 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 MOGAT2Q3SYC2 334 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 LY6G6FQ5SQ64 297 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 LYG1Q8N1E2 194 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 C11orf44Q8N8P7 122 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 MGAT4AQ9UM21 535 aa21.04■□□□□ 0.96
CDK9-202ENST00000421939 LOC100506127A0A0U1RQW1 187 aa21.03■□□□□ 0.96
CDK9-202ENST00000421939 C2orf68Q2NKX9 166 aa21.03■□□□□ 0.96
CDK9-202ENST00000421939 TSPAN14Q8NG11 270 aa21.03■□□□□ 0.96
CDK9-202ENST00000421939 PTX4Q96A99 478 aa21.03■□□□□ 0.96
CDK9-202ENST00000421939 VCX3AQ9NNX9 186 aa21.03■□□□□ 0.96
CDK9-202ENST00000421939 TET2Q6N021 2002 aaPredicted RBP21.03■□□□□ 0.96
CDK9-202ENST00000421939 A0A087WXM4 84 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 SH2D7A6NKC9 451 aaPredicted RBP21.02■□□□□ 0.96
CDK9-202ENST00000421939 LANCL1O43813 399 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 EBI3Q14213 229 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 OR2AK2Q8NG84 335 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 OR10R2Q8NGX6 335 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 WIPF2Q8TF74 440 aaPredicted RBP21.02■□□□□ 0.96
CDK9-202ENST00000421939 Q9N2K0 584 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 KCNK7Q9Y2U2 307 aa21.02■□□□□ 0.96
CDK9-202ENST00000421939 METTL21EPA6NDL7 271 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 RAB27BO00194 218 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 FBXO24O75426 580 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 CD1BP29016 333 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 SDC2P34741 201 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 MRPS15P82914 257 aaKnown RBP21.01■□□□□ 0.95
CDK9-202ENST00000421939 SFXN4Q6P4A7 337 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 C5orf56Q8N8D9 126 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 EAF1Q96JC9 268 aaPredicted RBP21.01■□□□□ 0.95
CDK9-202ENST00000421939 RNF167Q9H6Y7 350 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 DAPK2Q9UIK4 370 aa21.01■□□□□ 0.95
CDK9-202ENST00000421939 MFNGO00587 321 aa21■□□□□ 0.95
CDK9-202ENST00000421939 FGF16O43320 207 aa21■□□□□ 0.95
CDK9-202ENST00000421939 TSPAN15O95858 294 aa21■□□□□ 0.95
CDK9-202ENST00000421939 CD3GP09693 182 aa21■□□□□ 0.95
CDK9-202ENST00000421939 HIST1H1DP16402 221 aaKnown RBP21■□□□□ 0.95
CDK9-202ENST00000421939 C9orf152Q5JTZ5 239 aa21■□□□□ 0.95
CDK9-202ENST00000421939 ODF3L1Q8IXM7 274 aa21■□□□□ 0.95
CDK9-202ENST00000421939 OR2T10Q8NGZ9 312 aa21■□□□□ 0.95
CDK9-202ENST00000421939 MMP27Q9H306 513 aa21■□□□□ 0.95
CDK9-202ENST00000421939 GNB3P16520 340 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 MXD1Q05195 221 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 HIST2H2BDQ6DRA6 164 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 Q8N6K4 173 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 CENPOQ9BU64 300 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 ATG5Q9H1Y0 275 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 IFI27L2Q9H2X8 130 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 SLC23A1Q9UHI7 598 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 CMYA5Q8N3K9 4069 aa20.99■□□□□ 0.95
CDK9-202ENST00000421939 A0A075B6Q4 140 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 ZNF736B4DX44 427 aaPredicted RBP20.98■□□□□ 0.95
CDK9-202ENST00000421939 SCTP09683 121 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 CLEC2LP0C7M8 214 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 CD28P10747 220 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 LSAMPQ13449 338 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 TIMM50Q3ZCQ8 353 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 PARP12Q9H0J9 701 aaKnown RBP20.98■□□□□ 0.95
CDK9-202ENST00000421939 OR1A1Q9P1Q5 309 aa20.98■□□□□ 0.95
CDK9-202ENST00000421939 SAA2-SAA4A0A096LPE2 208 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 SERPINE3A8MV23 424 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 ST8SIA5O15466 376 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 HSPA12AO43301 675 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 MOSP00540 346 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 CSF1P09603 554 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 SAA2P0DJI9 122 aaPredicted RBP20.97■□□□□ 0.95
CDK9-202ENST00000421939 SNRPBP14678 240 aaKnown RBP20.97■□□□□ 0.95
CDK9-202ENST00000421939 ZBTB25P24278 435 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 ZNF833PQ6ZTB9 187 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 LGALS14Q8TCE9 139 aa20.97■□□□□ 0.95
CDK9-202ENST00000421939 TRDCB7Z8K6 153 aa20.96■□□□□ 0.95
CDK9-202ENST00000421939 FCGR3AP08637 254 aa20.96■□□□□ 0.95
CDK9-202ENST00000421939 OR3A3P47888 321 aa20.96■□□□□ 0.95
CDK9-202ENST00000421939 MRPL20Q9BYC9 149 aaKnown RBP20.96■□□□□ 0.95
CDK9-202ENST00000421939 NCBP2LA6PVI3 153 aaKnown RBP20.95■□□□□ 0.94
CDK9-202ENST00000421939 ITGB1BP1O14713 200 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 CEACAM6P40199 344 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 ARL6IP1Q15041 203 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 FAM71F2Q6NXP2 309 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 EDARADDQ8WWZ3 215 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 NABP2Q9BQ15 211 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 PIPOXQ9P0Z9 390 aa20.95■□□□□ 0.94
CDK9-202ENST00000421939 IGKV1-6A0A0C4DH72 117 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 ARFRP1Q13795 201 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 KIR2DS1Q14954 304 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 CENPVQ7Z7K6 275 aaPredicted RBP20.94■□□□□ 0.94
CDK9-202ENST00000421939 OR5AU1Q8NGC0 362 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 OR8H1Q8NGG4 311 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 OR4A4PQ8NGN8 299 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 YIPF6Q96EC8 236 aa20.94■□□□□ 0.94
CDK9-202ENST00000421939 CITED2Q99967 270 aaPredicted RBP20.94■□□□□ 0.94
CDK9-202ENST00000421939 MEGF8Q7Z7M0 2845 aa20.93■□□□□ 0.94
CDK9-202ENST00000421939 TRIM64CA6NLI5 447 aa20.93■□□□□ 0.94
CDK9-202ENST00000421939 RAB29O14966 203 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms