RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 HSD17B6O14756 317 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 ENSAO43768 121 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 HLA-AP01891 365 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 OR8U9P0C7N5 309 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 RAB7AP51149 207 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 BCAP31P51572 246 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 PIGPP57054 158 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 PHLDA2Q53GA4 152 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 TMEM128Q5BJH2 165 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 SGPP2Q8IWX5 399 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 ADAD2Q8NCV1 583 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 OR8U1Q8NH10 309 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 C8orf46Q8TAG6 207 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 SEC22CQ9BRL7 303 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 RSRP1Q9BUV0 290 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 ALX4Q9H161 411 aaPredicted RBP14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 LINC00574Q9H8X3 128 aa14.11□□□□□ -0.15
CCDC28B-202ENST00000421922 IGHV4-30-2A0A087WSY4 118 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 A0A0A6YYJ9 748 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 IGKV1D-13A0A0B4J2D9 117 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 FOXH1O75593 365 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 SLC22A5O76082 557 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 IGKV1-13P0DP09 117 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 ANXA3P12429 323 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 MORN2Q502X0 79 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 CAPSLQ8WWF8 208 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 RTBDNQ9BSG5 229 aaPredicted RBP14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 TOLLIPQ9H0E2 274 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 MED28Q9H204 178 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 OR2D2Q9H210 308 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 OR51J1Q9H342 316 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 PSG11Q9UQ72 335 aa14.1□□□□□ -0.15
CCDC28B-202ENST00000421922 A0A0B4J293 547 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 C7orf66A4D0T2 115 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 SNRPGP15A8MWD9 76 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 RBP4P02753 201 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 VSIG10L2P0DP72 767 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 GNG10P50151 68 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 LOXL3P58215 753 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 LYG2Q86SG7 212 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 ABHD14AQ9BUJ0 271 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 SUCNR1Q9BXA5 334 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 PARP12Q9H0J9 701 aaKnown RBP14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 CCL28Q9NRJ3 127 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 SLC2A9Q9NRM0 540 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 ZNF221Q9UK13 617 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 KCNIP3Q9Y2W7 256 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 SESN1Q9Y6P5 492 aa14.09□□□□□ -0.15
CCDC28B-202ENST00000421922 VWC2LB2RUY7 222 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 C22orf46C9J442 243 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 ST8SIA5O15466 376 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 PFDN1O60925 122 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 GPR12P47775 334 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 LMO4P61968 165 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 LCN2P80188 198 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 DHRS2Q13268 280 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 PPP1R1AQ13522 171 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 ZNF818PQ6ZRF7 136 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 ZNF645Q8N7E2 425 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 OR52B4Q8NGK2 314 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 ZNF431Q8TF32 576 aaPredicted RBP14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 CASTOR1Q8WTX7 329 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 RTN4IP1Q8WWV3 396 aaPredicted RBP14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 MBD6Q96DN6 1003 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 AKR1E2Q96JD6 320 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 RNF150Q9ULK6 438 aa14.08□□□□□ -0.15
CCDC28B-202ENST00000421922 IGHV4-61A0A0C4DH41 118 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 RNF212BA8MTL3 300 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 A8MXK9 166 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 IGHV3-7P01780 117 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 IGHV1-8P0DP01 117 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 GNRHRP30968 328 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 ERVFRD-1P60508 538 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 LY6G6FQ5SQ64 297 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 ZNF626Q68DY1 528 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 BTNL3Q6UXE8 466 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 CADM3Q8N126 398 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 UXS1Q8NBZ7 420 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 ZBTB34Q8NCN2 500 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 LY6G5BQ8NDX9 201 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 LEAP2Q969E1 77 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 PHB2Q99623 299 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 GHITMQ9H3K2 345 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 NAA60Q9H7X0 242 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 C2CD3Q4AC94 2353 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 C9orf170A2RU37 121 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 CRYM-AS1A6NIL9 109 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 C17orf98A8MV24 154 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 M0R1W7 72 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 ITGB1BP1O14713 200 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 IFNA2P01563 188 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 USF1P22415 310 aaPredicted RBP14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 CD34P28906 385 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 DLX6P56179 175 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 RND3P61587 244 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 Q3ZCU0 254 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 Q5PR19 223 aa14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 FAM53AQ6NSI3 398 aaPredicted RBP14.07□□□□□ -0.16
CCDC28B-202ENST00000421922 C12orf45Q8N5I9 185 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms