RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 RAB27BO00194 218 aa17.05■□□□□ 0.32
CPNE1-211ENST00000420363 PPP1CCP36873 323 aaKnown RBP17.05■□□□□ 0.32
CPNE1-211ENST00000420363 SCAND1P57086 179 aa17.05■□□□□ 0.32
CPNE1-211ENST00000420363 OR52L2PQ8NGH6 319 aa17.05■□□□□ 0.32
CPNE1-211ENST00000420363 OR10R2Q8NGX6 335 aa17.05■□□□□ 0.32
CPNE1-211ENST00000420363 HDHD3Q9BSH5 251 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-211ENST00000420363 Q9N2K0 584 aa17.05■□□□□ 0.32
CPNE1-211ENST00000420363 A0A0B4J203 849 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 LOC100506127A0A0U1RQW1 187 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 SERPINE3A8MV23 424 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 MFNGO00587 321 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 FGF16O43320 207 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 LANCL1O43813 399 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 TMEM127O75204 238 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 HIST1H1DP16402 221 aaKnown RBP17.04■□□□□ 0.32
CPNE1-211ENST00000420363 TMEM11P17152 192 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 SDC2P34741 201 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 VDAC2P45880 294 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-211ENST00000420363 ARL6IP1Q15041 203 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 MOGAT2Q3SYC2 334 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 TGIF2LXQ8IUE1 241 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 SETD6Q8TBK2 473 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 WIPF2Q8TF74 440 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-211ENST00000420363 WNT10AQ9GZT5 417 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
CPNE1-211ENST00000420363 TET2Q6N021 2002 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-211ENST00000420363 SMIM30A4D0T7 59 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 ITGB1BP1O14713 200 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 SCGNO76038 276 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 IGKV1D-33P01593 117 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 IGKV1-33P01594 117 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 AMY1AP04745 511 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 AMY2AP04746 511 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 SLC2A2P11168 524 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-211ENST00000420363 CD1BP29016 333 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 REG1BP48304 166 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 MRPS15P82914 257 aaKnown RBP17.03■□□□□ 0.32
CPNE1-211ENST00000420363 HES1Q14469 280 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 FAM71F2Q6NXP2 309 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 MOB3BQ86TA1 216 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 LYG1Q8N1E2 194 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 OR2AK2Q8NG84 335 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 IL1F10Q8WWZ1 152 aa17.03■□□□□ 0.32
CPNE1-211ENST00000420363 CD3GP09693 182 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 ARSJQ5FYB0 599 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-211ENST00000420363 Q6ZS46 218 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 ODF3L1Q8IXM7 274 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 Q8N6K4 173 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 CENPOQ9BU64 300 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 IFI27L2Q9H2X8 130 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.02■□□□□ 0.321e-7■■■■□ 24.8
CPNE1-211ENST00000420363 DAPK2Q9UIK4 370 aa17.02■□□□□ 0.32
CPNE1-211ENST00000420363 DIRAS3O95661 229 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 VSIG10L2P0DP72 767 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 C2orf68Q2NKX9 166 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 ABCA11PQ4W5N1 156 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 ZNF833PQ6ZTB9 187 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 C5orf24Q7Z6I8 188 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 C5orf56Q8N8D9 126 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 OR2T10Q8NGZ9 312 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 EDARADDQ8WWZ3 215 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 YIPF6Q96EC8 236 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 RNF167Q9H6Y7 350 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 ETV7Q9Y603 341 aa17.01■□□□□ 0.31
CPNE1-211ENST00000420363 PEX14O75381 377 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 FCGR3AP08637 254 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 ZBTB25P24278 435 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 KIR2DS1Q14954 304 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 LGALS14Q8TCE9 139 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 EAF1Q96JC9 268 aaPredicted RBP17■□□□□ 0.31
CPNE1-211ENST00000420363 GHITMQ9H3K2 345 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 PIPOXQ9P0Z9 390 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 SLC23A1Q9UHI7 598 aa17■□□□□ 0.31
CPNE1-211ENST00000420363 TRDCB7Z8K6 153 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 GNB3P16520 340 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 MXD1Q05195 221 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 LSAMPQ13449 338 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 SRSF7Q16629 238 aaKnown RBP eCLIP16.99■□□□□ 0.311e-7■□□□□ 9.8
CPNE1-211ENST00000420363 TMEM95Q3KNT9 176 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 OR8H1Q8NGG4 311 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 OR4A4PQ8NGN8 299 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 CABLES2Q9BTV7 478 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 ATG5Q9H1Y0 275 aa16.99■□□□□ 0.31
CPNE1-211ENST00000420363 SAA2-SAA4A0A096LPE2 208 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 IGHV3-72A0A0B4J1Y9 119 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 HSPA12AO43301 675 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 AIREO43918 545 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 FBXO24O75426 580 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 MOSP00540 346 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 CLEC2LP0C7M8 214 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 SAA2P0DJI9 122 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-211ENST00000420363 SNRPBP14678 240 aaKnown RBP16.98■□□□□ 0.31
CPNE1-211ENST00000420363 SERPINB10P48595 397 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 Q6ZS49 121 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 CROCCP3Q8IVE0 287 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 TOLLIPQ9H0E2 274 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 RHBDL2Q9NX52 303 aa16.98■□□□□ 0.31
CPNE1-211ENST00000420363 RAB29O14966 203 aa16.97■□□□□ 0.31
CPNE1-211ENST00000420363 FABP7O15540 132 aa16.97■□□□□ 0.31
CPNE1-211ENST00000420363 SCTP09683 121 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms