RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 K7EMT4 169 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 SEMA4FO95754 770 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 IGHG1P01857 330 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 HBE1P02100 147 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 FGF1P05230 155 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 FABP3P05413 133 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 MELTFP08582 738 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 SFTA3P0C7M3 94 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 GIMD1P0DJR0 217 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 DLX5P56178 289 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM33P57088 247 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF345Q14585 488 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 TGIF1Q15583 401 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 ATP6AP1LQ52LC2 224 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 AKR1C8PQ5T2L2 129 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 CDS1Q92903 461 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 OR2M4Q96R27 311 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 HCAR1Q9BXC0 346 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 MFSD1Q9H3U5 465 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 NOX3Q9HBY0 568 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 RPS10P5Q9NQ39 176 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 TAS2R5Q9NYW4 299 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 DKKL1Q9UK85 242 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 V9GYS6 101 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 MYO18BQ8IUG5 2567 aa4.06□□□□□ -1.76
VPS13A-207ENST00000419472 TRDV1A0A1B0GX56 115 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 TSPAN11A1L157 253 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 C20orf202A1L168 122 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FAM183AA6NL82 134 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 MFNGO00587 321 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 AZIN1O14977 448 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 BCL2L11O43521 198 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 GSTZ1O43708 216 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CREBL2O60519 120 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 LINC00032P0C843 101 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 LAMP1P11279 417 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FOLR1P15328 257 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CSNK2A2P19784 350 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 S100A7P31151 101 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 KDELR2P33947 212 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 APLNRP35414 380 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RAB8AP61006 207 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RPS25P62851 125 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 C1DQ13901 141 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 OR4D1Q15615 310 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 PWWP2BQ6NUJ5 590 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 ABHD12Q8N2K0 398 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 IQCF1Q8N6M8 205 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 ACBD7Q8N6N7 88 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CXorf40AQ8TE69 158 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 THEM6Q8WUY1 208 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 EEF1AKMT3Q96AZ1 226 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CLDN23Q96B33 292 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 TRIB3Q96RU7 358 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 GPR21Q99679 349 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FOXC2Q99958 501 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF430Q9H8G1 570 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 MOB1AQ9H8S9 216 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 REEP1Q9H902 201 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM27Q9HBJ8 222 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 SPRR3Q9UBC9 169 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 DOCK8Q8NF50 2099 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RBMY1BA6NDE4 496 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RBMY1EA6NEQ0 496 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 LRRN3E7EW58 273 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 F5H5P2 479 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 F6UB75 175 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 H3BN98 237 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CCL25O15444 150 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 MT-ND4P03905 459 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CD5P06127 495 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RBMY1DP0C7P1 496 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RBMY1A1P0DJD3 496 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FABP4P15090 132 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 PSMB1P20618 241 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 AGTR1P30556 359 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 IDH2P48735 452 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CAV2P51636 162 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 STC1P52823 247 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FOXA1P55317 472 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 H2BFSP57053 126 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FABP5Q01469 135 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 OR2F1Q13607 317 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FHL1Q13642 323 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 GINS1Q14691 196 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 HERPUD1Q15011 391 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF146Q15072 292 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FAM78AQ5JUQ0 283 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 IDNKQ5T6J7 187 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 GRINAQ7Z429 371 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 WDFY1Q8IWB7 410 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 FAM24BQ8N5W8 94 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 OR8U1Q8NH10 309 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 SKA2Q8WVK7 121 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 RNF126Q9BV68 326 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 SELENOIQ9C0D9 397 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 PLEKHA1Q9HB21 404 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 C1orf109Q9NX04 203 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF282Q9UDV7 671 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 OR52A1Q9UKL2 312 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms