RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SUMO3P55854 103 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 CCL28Q9NRJ3 127 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 PIGBOS1A0A0B4J2F0 54 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 IGHV2-70DA0A0C4DH43 119 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 CCDC85CA6NKD9 419 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 M0R135 149 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 TUSC2O75896 110 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 CELA2BP08218 269 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 HNRNPA3P51991 378 aaKnown RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 SNAI3Q3KNW1 292 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 ACSM6Q6P461 480 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 Q6ZN92 141 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 OR10V1Q8NGI7 309 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF799Q96GE5 643 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 SAMD10Q9BYL1 202 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 FBXL7Q9UJT9 491 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 UBE2L5PA0A1B0GUS4 154 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 PAGE4O60829 102 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 PGLYRP1O75594 196 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 NRASP01111 189 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 KRASP01116 189 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 IAPPP10997 89 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 MSR1P21757 451 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 F2RP25116 425 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 RBM11P57052 281 aaKnown RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 UBE2G2P60604 165 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 PDCD1Q15116 288 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 Q6ZRM9 215 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 MYPOPQ86VE0 399 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 GCNT2Q8N0V5 402 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 BORCS8Q96FH0 119 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 TXN2Q99757 166 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 RNF114Q9Y508 228 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 IGHV2OR16-5A0A0B4J2B6 119 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 DIRC3C9JPN6 131 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 PLA2G5P39877 138 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 DAZAP2Q15038 168 aaPredicted RBP6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 FFAR4Q5NUL3 377 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 OR5P3Q8WZ94 311 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 APH1AQ96BI3 265 aa6.84□□□□□ -1.32
HMGXB4-202ENST00000418170 TIAF1O95411 115 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 Q0VG73 95 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SRSF7Q16629 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 C11orf94C9JXX5 98 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 CBR3O75828 277 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF468Q5VIY5 522 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 UNQ5815/PRO19632Q6UWF5 114 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SIGLECL1Q8N7X8 197 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 PSMF1Q92530 271 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 STARD4Q96DR4 205 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SFRP2Q96HF1 295 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 OXGR1Q96P68 337 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 TUBG2Q9NRH3 451 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 CACNG5Q9UF02 275 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 TDRD6O60522 2096 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 OR7C1O76099 320 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 TNFP01375 233 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SCTP09683 121 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 CBLN1P23435 193 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 GUCA1AP43080 201 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 KIR2DL1P43626 348 aaPredicted RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 KRTDAPP60985 99 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 YPEL5P62699 121 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SLC38A11Q08AI6 406 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 FBLN7Q53RD9 439 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 BAGE3Q86Y29 109 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 BAGE2Q86Y30 109 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 OR10G9Q8NGN4 311 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 OR10G7Q8NGN6 311 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 OR2AE1Q8NHA4 323 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 SPPL3Q8TCT6 385 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 MRPL18Q9H0U6 180 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 IL23AQ9NPF7 189 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 HSPB7Q9UBY9 170 aa6.83□□□□□ -1.32
HMGXB4-202ENST00000418170 EPOPA6NHQ4 379 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 SERPINE2P07093 398 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 GPX1P07203 203 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 EN2P19622 333 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 BLKP51451 505 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 NSDHLQ15738 373 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 Q6ZVH6 145 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 KMT5CQ86Y97 462 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 OR4C5Q8NGB2 326 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 LSM10Q969L4 123 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 SPTSSAQ969W0 71 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 F2Z2F3 143 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 RBFOX2O43251 390 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 PDE6DO43924 150 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 FBXW4P57775 412 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 GNB1P62873 340 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 PLPPR5Q32ZL2 321 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms