RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RBFOX3A6NFN3 312 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PRR32B1ATL7 298 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 F5H697 171 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 M0R233 179 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 MYL12BO14950 172 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 TRIAP1O43715 76 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 GPR137BO60478 399 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SLC2A10O95528 541 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 APOHP02749 345 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SMIM10L2AP0DMW4 78 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SMIM10L2BP0DMW5 78 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 EGR2P11161 476 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 GP1BBP13224 206 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 NTF3P20783 257 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 OR10J1P30954 320 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PLA2G5P39877 138 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 CTRLP40313 264 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 KIR2DS2P43631 304 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 RPS27AP62979 156 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 FABP5Q01469 135 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 LOXL1Q08397 574 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 FAM27E3Q08E93 113 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 COA6Q5JTJ3 125 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 IBA57Q5T440 356 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 TSPO2Q5TGU0 170 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 UFSP1Q6NVU6 142 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF773Q6PK81 442 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 C9orf139Q6ZV77 190 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 MRPL55Q7Z7F7 128 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM139Q8IV31 216 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 STPG4Q8N801 248 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SUMF2Q8NBJ7 301 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 OR51A4Q8NGJ6 313 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 OR2T27Q8NH04 317 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 OR10D3Q8NH80 312 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PPTC7Q8NI37 304 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ARPC1AQ92747 370 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM125Q96AQ2 219 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 FMC1Q96HJ9 113 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 HIST1H2BLQ99880 126 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ADAT1Q9BUB4 502 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 C1QTNF6Q9BXI9 259 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SELENOIQ9C0D9 397 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SLC25A31Q9H0C2 315 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 POLR2J3Q9H1A7 115 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 WDR13Q9H1Z4 485 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 RERGLQ9H628 205 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 RPRMQ9NS64 109 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 DNAJC27Q9NZQ0 273 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF629Q9UEG4 869 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 IL36AQ9UHA7 158 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SHPKQ9UHJ6 478 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 VAX2Q9UIW0 290 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 RNF11Q9Y3C5 154 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 MED31Q9Y3C7 131 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 MRPS16Q9Y3D3 137 aaKnown RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SOX21Q9Y651 276 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 R4GN57 208 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 SHROOM2Q13796 1616 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 NCOA2Q15596 1464 aa2.96□□□□□ -1.93
SF3B1-203ENST00000414174 TP53BP1Q12888 1972 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 TMED7-TICAM2A0A0A6YYA0 188 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 IGHV1-69-2A0A0G2JMI3 117 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 MED19A0JLT2 244 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 MEIS3P1A6NDR6 274 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 B4DEV8 164 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 SHISA9B4DS77 424 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 DIRC3C9JPN6 131 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 NPFFO15130 113 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 SPRY3O43610 288 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 FGF17O60258 216 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 REM1O75628 298 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 IGHMP01871 453 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 LGALS2P05162 132 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 CD14P08571 375 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 LINC00694P0DN24 101 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 CXCL3P19876 107 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 GPM6AP51674 278 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 DIO3P55073 304 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 FOXA1P55317 472 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 PRDX4Q13162 271 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ENDOGQ14249 297 aaKnown RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 OPCMLQ14982 345 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 KIAA0040Q15053 153 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 HMGN3Q15651 99 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF726P1Q15940 193 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ANXA2RQ3ZCQ2 193 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 LGALSLQ3ZCW2 172 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 PHLDA2Q53GA4 152 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 TCEAL5Q5H9L2 206 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 FAM201AQ5SY85 155 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 Q5XG85 94 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF549Q6P9A3 640 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 CNIH2Q6PI25 160 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 Q6Q795 121 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 Q75L30 129 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 LRP11Q86VZ4 500 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF695Q8IW36 515 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms