RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 KCNAB3O43448 404 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 NANOS1Q8WY41 292 aaKnown RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 C5orf66Q9H5L9 145 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 AK3Q9UIJ7 227 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 URGCP-MRPS24S4R325 110 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 H3BQ15 152 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 SDCBPO00560 298 aaPredicted RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 TOMM40O96008 361 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 NGFP01138 241 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 PDLIM4P50479 330 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 FGF8P55075 233 aaPredicted RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 PRDX4Q13162 271 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 TMEM128Q5BJH2 165 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 AADACL3Q5VUY0 350 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 GBGT1Q8N5D6 347 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 HDHD3Q9BSH5 251 aaPredicted RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 ZNF430Q9H8G1 570 aaPredicted RBP11.11□□□□□ -0.63
LITAF-203ENST00000413364 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
LITAF-203ENST00000413364 IGKV1D-8A0A087WSZ0 117 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 MSTNO14793 375 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ID4P47928 161 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 MRPL49Q13405 166 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 RPL7L1Q6DKI1 246 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 MYPOPQ86VE0 399 aaPredicted RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 CALHM1Q8IU99 346 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ZNF611Q8N823 705 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 TMEM230Q96A57 120 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 HSPB7Q9UBY9 170 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ST3GAL6Q9Y274 331 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ARHGAP21Q5T5U3 1957 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 TRBV24-1A0A075B6N3 115 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ZNF891A8MT65 544 aaPredicted RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 RBM11P57052 281 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 UBE2G2P60604 165 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 DEFB109BQ30KR1 87 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 CEACAM21Q3KPI0 293 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 ZDHHC23Q8IYP9 409 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 RTBDNQ9BSG5 229 aaPredicted RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 COL25A1Q9BXS0 654 aaPredicted RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 FGF23Q9GZV9 251 aaPredicted RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 CRIM1Q9NZV1 1036 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
LITAF-203ENST00000413364 PTPRBP23467 1997 aa11.1□□□□□ -0.63
LITAF-203ENST00000413364 C13orf42A0A1B0GVH6 325 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 PDCD6O75340 191 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 SFT2D2O95562 160 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 CEACAM1P13688 526 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 BATFQ16520 125 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 MDP1Q86V88 176 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 NAGKQ9UJ70 344 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 AQP7O14520 342 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 CEACAM4O75871 244 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 DANCRP0C864 163 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 RND2P52198 227 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 VWA1Q6PCB0 445 aa11.09□□□□□ -0.63
LITAF-203ENST00000413364 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 H0YIZ8 118 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 TNFSF13O75888 250 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 PI3P19957 117 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 ECI1P42126 302 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 GPM6AP51674 278 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 MEX3BQ6ZN04 569 aaKnown RBP11.08□□□□□ -0.64
LITAF-203ENST00000413364 OR4C5Q8NGB2 326 aa11.08□□□□□ -0.64
LITAF-203ENST00000413364 XKRY2A2RUG3 117 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A10PA6NDY2 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A18PA6NE21 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A16PA6NEW6 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A20PA6NIJ5 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A8PA6NJQ4 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A7PA6NKC0 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A22PA8MWA6 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A12PA8MX19 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A5PA8MXJ8 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A23PA8MXZ1 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 F6UZH7 168 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 TM4SF5O14894 197 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 WISP2O76076 250 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 FAM90A15PP0C7V4 464 aa11.07□□□□□ -0.64
LITAF-203ENST00000413364 SEC11BP0C7V7 166 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms