RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MRPL33O75394 65 aaKnown RBP14.96□□□□□ -0.02
SDCBP-202ENST00000413219 CD55P08174 381 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 RFPL3SP0C7P2 107 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 MDKP21741 143 aaPredicted RBP14.96□□□□□ -0.02
SDCBP-202ENST00000413219 GALR1P47211 349 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF585BQ52M93 769 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 TMEM14EPQ6UXP3 125 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 FAM58AQ8N1B3 248 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 C17orf78Q8N4C9 275 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 RPP25LQ8N5L8 163 aaKnown RBP14.96□□□□□ -0.02
SDCBP-202ENST00000413219 RDH5Q92781 318 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 ANAPC16Q96DE5 110 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 TP53TG5Q9Y2B4 290 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 XKRY2A2RUG3 117 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 HS3ST1O14792 307 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 HRASP01112 189 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 CCNOP22674 350 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 LBX1P52954 281 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 ELLP55199 621 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-202ENST00000413219 TESK1Q15569 626 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 ATP6V1FQ16864 119 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 SLC23A3Q6PIS1 610 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 NDUFAF3Q9BU61 184 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 PKIBQ9C010 78 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-202ENST00000413219 MANBALQ9NQG1 85 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 OR1A1Q9P1Q5 309 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 MPC1Q9Y5U8 109 aa14.95□□□□□ -0.02
SDCBP-202ENST00000413219 CTXND1A0A1B0GTU2 59 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 MBP02144 154 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 FOLR3P41439 243 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 SPANXN5Q5MJ07 72 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 BEND4Q6ZU67 534 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 UBE2L5PA0A1B0GUS4 154 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 TRAPPC6AO75865 159 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 IGHEP01854 428 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 TYMSP04818 313 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 GFRA1P56159 465 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 GNG3P63215 75 aa14.94□□□□□ -0.02
SDCBP-202ENST00000413219 ACOT6Q3I5F7 207 aaPredicted RBP14.94□□□□□ -0.02
SDCBP-202ENST00000413219 RNF212BA8MTL3 300 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 GGCTO75223 188 aaKnown RBP14.93□□□□□ -0.02
SDCBP-202ENST00000413219 IGKV1D-33P01593 117 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 IGHV3-9P01782 118 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 NDUFB7P17568 137 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 GZMHP20718 246 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 HOXA6P31267 233 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 SRP14P37108 136 aaKnown RBP14.93□□□□□ -0.02
SDCBP-202ENST00000413219 RAB4BP61018 213 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF66Q6ZN08 573 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.93□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF664Q8N3J9 261 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 IL1F10Q8WWZ1 152 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 PARLQ9H300 379 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 OR51I2Q9H344 312 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 ANKRD30BLA7E2S9 258 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 VENTXO95231 258 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 TRA2AQ13595 282 aaKnown RBP eCLIP14.93□□□□□ -0.02
SDCBP-202ENST00000413219 SSX2Q16385 188 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 ACTL10Q5JWF8 245 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 IFI44Q8TCB0 444 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 RPUSD4Q96CM3 377 aaKnown RBP14.93□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 PRRG4Q9BZD6 226 aa14.93□□□□□ -0.02
SDCBP-202ENST00000413219 CCL2P13500 99 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 SELLP14151 372 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 GDF1P27539 372 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 ARR3P36575 388 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 NUBP1P53384 320 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 ERVS71-1P61550 626 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 Q6P435 159 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 CISD2Q8N5K1 135 aaKnown RBP14.92□□□□□ -0.02
SDCBP-202ENST00000413219 TMEM147Q9BVK8 224 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF576Q9H609 170 aa14.92□□□□□ -0.02
SDCBP-202ENST00000413219 K7ESF4 209 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 TUBG1P23258 451 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 CCKARP32238 428 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 TNFRSF9Q07011 255 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 ACSM6Q6P461 480 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 FAM180AQ6UWF9 173 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 DMRTC2Q8IXT2 367 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-202ENST00000413219 NECAP1Q8NC96 275 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 TMEM18Q96B42 140 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 MISP3Q96FF7 219 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 POM121L2Q96KW2 1035 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 HSPB7Q9UBY9 170 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 A0A096LPE4 126 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 A0A1W2PPZ6 126 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 SPCS3P61009 180 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 P2RY6Q15077 328 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 LYSMD4Q5XG99 296 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF497Q6ZNH5 498 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 OR1K1Q8NGR3 316 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 OR2T10Q8NGZ9 312 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 PCGF1Q9BSM1 259 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 DEPPQ9NTK1 212 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 KCNS2Q9ULS6 477 aa14.91□□□□□ -0.02
SDCBP-202ENST00000413219 RBM7Q9Y580 266 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms