RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FAM90A22PA8MWA6 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A12PA8MX19 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A5PA8MXJ8 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A23PA8MXZ1 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 RFPL4AL1F8VTS6 287 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 HBE1P02100 147 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A15PP0C7V4 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A13PP0C7W8 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A14PP0C7W9 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A24PP0C7X0 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FCGR2CP31995 323 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 CCL8P80075 99 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 EFNB1P98172 346 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 IFITM3Q01628 133 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FOXF2Q12947 444 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 PDLIM3Q53GG5 364 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 LIAT1Q6ZQX7 453 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 Q71RC1 249 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 DMBX1Q8NFW5 382 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 SEC22AQ96IW7 307 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 C2orf50Q96LR7 162 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 BARX1Q9HBU1 254 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 POM121CA8CG34 1229 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 PYCARD-AS1I3L0S3 204 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 RGS13O14921 159 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 SMPD2O60906 423 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 JTBO76095 146 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ADRA2CP18825 462 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 GZMHP20718 246 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FGF7P21781 194 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ACKR3P25106 362 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 HBG1P69891 147 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 HBG2P69892 147 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 CLEC2AQ6UVW9 174 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM222BQ8WU58 562 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ST6GAL2Q96JF0 529 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 SH2D7A6NKC9 451 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 VSIG8P0DPA2 414 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ZBTB25P24278 435 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 PLA1AQ53H76 456 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 RPS4Y2Q8TD47 263 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 AKR1E2Q96JD6 320 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 A0A087WV48 116 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 M0R143 59 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 BCL3P20749 454 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
SYNE1-211ENST00000413186 CACNG7P62955 275 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 OR5I1Q13606 314 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 PRAMEF6Q5VXH4 476 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 BTNL3Q6UXE8 466 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 C6orf201Q7Z4U5 140 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 ZNF680Q8NEM1 530 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 ITLN1Q8WWA0 313 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 LAMP3Q9UQV4 416 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 BOLA1Q9Y3E2 137 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 HEATR5AQ86XA9 2040 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 hCG_38984A0A1B0GV85 526 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 PHF1O43189 567 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-211ENST00000413186 OR2B8PP59922 312 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 FGF12P61328 243 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 SLC38A6Q8IZM9 456 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 LFNGQ8NES3 379 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 REPIN1Q9BWE0 567 aaKnown RBP7.32□□□□□ -1.24
SYNE1-211ENST00000413186 RASL12Q9NYN1 266 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 SDCBPO00560 298 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-211ENST00000413186 PDGFAP04085 211 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 S100A8P05109 93 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 BSPH1Q075Z2 132 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 RTL8BQ17RB0 113 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 BRICD5Q6PL45 260 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 OR13C8Q8NGS7 320 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 WIPI2Q9Y4P8 454 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 FREM3P0C091 2139 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 KCNAB3O43448 404 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-211ENST00000413186 POU2AF1Q16633 256 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 TMEM97Q5BJF2 176 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 CLLU1Q5K131 121 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 TMEM268Q5VZI3 342 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 ALKAL2Q6UX46 152 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 OR4B1Q8NGF8 309 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 ANAPC13Q9BS18 74 aa7.32□□□□□ -1.24
SYNE1-211ENST00000413186 E5RGE8 158 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 M0R1X1 148 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 MT-ND4LP03901 98 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 DTYMKP23919 212 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 GNB2P62879 340 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 AESQ08117 197 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 EXOSC2Q13868 293 aaKnown RBP7.31□□□□□ -1.24
SYNE1-211ENST00000413186 IGFBP7Q16270 282 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 PHLDA2Q53GA4 152 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 OR52L2PQ8NGH6 319 aa7.31□□□□□ -1.24
SYNE1-211ENST00000413186 RBPMSQ93062 196 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms