RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 HIST2H3AQ71DI3 136 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 CBLN2Q8IUK8 224 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 C1orf174Q8IYL3 243 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF101Q8IZC7 436 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 OR52E2Q8NGJ4 325 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 OR2G2Q8NGZ5 317 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 CLDND2Q8NHS1 167 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 NANPQ8TBE9 248 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 SLC25A40Q8TBP6 338 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 ASB17Q8WXJ9 295 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 AQP3Q92482 292 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 FAM3DQ96BQ1 224 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 RASD2Q96D21 266 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 MARS2Q96GW9 593 aaKnown RBP4.43□□□□□ -1.7
LINC00342-201ENST00000412393 C4orf45Q96LM5 186 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 S100A13Q99584 98 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 TBX5Q99593 518 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 PHB2Q99623 299 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF471Q9BX82 626 aaPredicted RBP4.43□□□□□ -1.7
LINC00342-201ENST00000412393 OR2J1Q9GZK6 312 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 WNT5BQ9H1J7 359 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 SYT4Q9H2B2 425 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 ELOVL3Q9HB03 270 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 RHOFQ9HBH0 211 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 C19orf12Q9NSK7 152 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 MRPL15Q9P015 296 aaKnown RBP4.43□□□□□ -1.7
LINC00342-201ENST00000412393 MRM2Q9UI43 246 aaKnown RBP4.43□□□□□ -1.7
LINC00342-201ENST00000412393 LAMP5Q9UJQ1 280 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 GNG8Q9UK08 70 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 IER3IP1Q9Y5U9 82 aa4.43□□□□□ -1.7
LINC00342-201ENST00000412393 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TRAV18A0A075B6X5 111 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 A0A087WWC5 75 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 IGHV1-69-2A0A0G2JMI3 117 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 A0A1W2PPK0 400 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 OR2AT4A6NND4 320 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 B4DSR2 109 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF736B4DX44 427 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 WNT9BO14905 357 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 PHF1O43189 567 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TGOLN2O43493 480 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SLC16A7O60669 478 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 JTBO76095 146 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 CYB5AP00167 134 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 NGFP01138 241 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 COX5BP10606 129 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 CLUP10909 449 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 HIST1H1BP16401 226 aaKnown RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 CTLA4P16410 223 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 RAB5AP20339 215 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SRP14P37108 136 aaKnown RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 CDX1P47902 265 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 RAB5CP51148 216 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 F2RL1P55085 397 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 ATRQ13535 2644 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TAF13Q15543 124 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 RAB11BQ15907 218 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 ACTBL2Q562R1 376 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM128Q5BJH2 165 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 FAM74A1Q5RGS3 127 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 VAX1Q5SQQ9 334 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM268Q5VZI3 342 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 OTPQ5XKR4 325 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM88Q6PEY1 159 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 C11orf88Q6PI97 169 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 DEGS2Q6QHC5 323 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 PEG10Q86TG7 708 aaKnown RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 NAA40Q86UY6 237 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 HOGA1Q86XE5 327 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 ARRDC1Q8N5I2 433 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 UBAC2Q8NBM4 344 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 OR8G5Q8NG78 346 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 OR13D1Q8NGV5 346 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 KLF14Q8TD94 323 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM158Q8WZ71 300 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 ZMYND19Q96E35 227 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SCGB3A2Q96PL1 93 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 NEU1Q99519 415 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SSX3Q99909 188 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 GPR61Q9BZJ8 451 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 SLC5A7Q9GZV3 580 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 COMMD4Q9H0A8 199 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 WDR76Q9H967 626 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 CHMP1AQ9HD42 196 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 DECR2Q9NUI1 292 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 PLEK2Q9NYT0 353 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 VSX1Q9NZR4 365 aaPredicted RBP4.42□□□□□ -1.7
LINC00342-201ENST00000412393 KCNG2Q9UJ96 466 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 RAB22AQ9UL26 194 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 GTF2A1LQ9UNN4 478 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 RHBDD3Q9Y3P4 386 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
LINC00342-201ENST00000412393 TRAV8-7A0A075B6U6 113 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 H0YIZ8 118 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 SPRY3O43610 288 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TIMM8AO60220 97 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms