RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 FBXO7Q9Y3I1 522 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LDLRAD4O15165 306 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CA11O75493 328 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SC5DO75845 299 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ATP5HO75947 161 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 IGFBP3P17936 291 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR3A3P47888 321 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ETV1P50549 477 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 PITPNAQ00169 270 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 C19orf54Q5BKX5 351 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR2G6Q5TZ20 316 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CYYR1Q96J86 154 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SELENOIQ9C0D9 397 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 BANF2Q9H503 90 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FGF20Q9NP95 211 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CKLFQ9UBR5 152 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 JPT1Q9UK76 154 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 A3GALT2U3KPV4 340 aa10.98□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TRAV8-7A0A075B6U6 113 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LOC100130705A0A1B0GUX0 176 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OGG1O15527 345 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GPX5O75715 221 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NDUFA3O95167 84 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 IGHV3-11P01762 117 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MAS1P04201 325 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 HSPB1P04792 205 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FUT3P21217 361 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CX3CL1P78423 397 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NDPQ00604 133 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LRRC36Q1X8D7 754 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ZNF660Q6AZW8 331 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 AWAT2Q6E213 333 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TMPRSS11AQ6ZMR5 421 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ABHD5Q8WTS1 349 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 APH1BQ8WW43 257 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GHSRQ92847 366 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 BABAM2Q9NXR7 383 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NUBP2Q9Y5Y2 271 aa10.97□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SAA2-SAA4A0A096LPE2 208 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TRBV5-5A0A0J9YX44 114 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 A0A1W2PPK0 400 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FAM90A7PA6NKC0 464 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FAM90A23PA8MXZ1 464 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 H3BNX3 289 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FCN1O00602 326 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 YPEL1O60688 119 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CRTAPO75718 401 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RGS11O94810 467 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GLAP06280 429 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SAA2P0DJI9 122 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MGMTP16455 207 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 DCKP27707 260 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CRIP2P52943 208 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 HTD2P86397 168 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TMEM267Q0VDI3 215 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 PLGLAQ15195 96 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SMN1Q16637 294 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 Q499Y3 187 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SIGIRRQ6IA17 410 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ADAMTSL5Q6ZMM2 481 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ZNF554Q86TJ5 538 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 HAPLN4Q86UW8 402 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 Q8N1Y9 231 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TCTEX1D1Q8N7M0 179 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MRPL30Q8TCC3 161 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 FLYWCH2Q96CP2 140 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MS4A10Q96PG2 267 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 YPEL2Q96QA6 119 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 EDA2RQ9HAV5 297 aa10.96□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RRHO14718 337 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LALBAP00709 142 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LY6G6FQ5SQ64 297 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PYHIN1Q6K0P9 492 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FAM131AQ6UXB0 335 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PPP1R27Q86WC6 154 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 OR2AK2Q8NG84 335 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 GALMQ96C23 342 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 Q96M66 194 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RDH12Q96NR8 316 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SLC29A1Q99808 456 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ELOVL1Q9BW60 279 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 C19orf73Q9NVV2 129 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LYSTQ99698 3801 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 HSPA12AO43301 675 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 BAG2O95816 211 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FSTP19883 344 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ACTBL2Q562R1 376 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 YIF1BQ5BJH7 314 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms