RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 STIP1P31948 543 aaKnown RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PPICP45877 212 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GPR3P46089 330 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 RBM11P57052 281 aaKnown RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 TPI1P60174 286 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 SULT2A1Q06520 285 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GABPAQ06546 454 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GPM6BQ13491 265 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 EIF2B1Q14232 305 aaKnown RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 MELKQ14680 651 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 P2RY14Q15391 338 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 ZNF542PQ5EBM4 170 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2G6Q5TZ20 316 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM27BQ5VT28 67 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1orf189Q5VU69 101 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q6ZN92 141 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 RBM43Q6ZSC3 357 aaKnown RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 IKBIPQ70UQ0 350 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAB11FIP2Q7L804 512 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PID1Q7Z2X4 250 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 NKAIN4Q8IVV8 208 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 FTSJ3Q8IY81 847 aaKnown RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 BBS5Q8N3I7 341 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2C3Q8N628 320 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMCO5AQ8N6Q1 288 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4S1Q8NGB4 309 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR1L6Q8NGR2 347 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GOLGA5Q8TBA6 731 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 BRI3BPQ8WY22 251 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CENPNQ96H22 339 aaPredicted RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 USMG5Q96IX5 58 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 C9orf72Q96LT7 481 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC138Q96M89 665 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC94Q9BW85 323 aaPredicted RBP-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 SUCNR1Q9BXA5 334 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 ZYG11BQ9C0D3 744 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 DERL2Q9GZP9 239 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM192AQ9GZU8 254 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 FOLH1BQ9HBA9 442 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GSN-AS1Q9NRJ2 163 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 LAMTOR3Q9UHA4 124 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 BAIAP2Q9UQB8 552 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBE2D4Q9Y2X8 147 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 SNX8Q9Y5X2 465 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PXDNQ92626 1479 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 LRP5O75197 1615 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAV30A0A087WSZ9 112 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 A0A1W2PPC4 97 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 A0A1W2PR77 199 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SHTN1A0MZ66 631 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM72A0PK05 275 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRIM43BA6NCK2 446 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR5H14A6NHG9 310 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 K7EP13 123 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 AP3B1O00203 1094 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDC7O00311 574 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CHADO15335 359 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBL3O95164 117 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV2-70P01814 119 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SDSP20132 328 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 NT5EP21589 574 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CRHBPP24387 322 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ERP29P30040 261 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAS1LP35410 378 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 HSD17B3P37058 310 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CD86P42081 329 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 P2RY1P47900 373 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TSPAN5P62079 268 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 MRPS34P82930 218 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 GOLGA8FQ08AF8 430 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 NCBP1Q09161 790 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SF3A3Q12874 501 aaKnown RBP eCLIP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 BNIP1Q12981 228 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ARHGAP15Q53QZ3 475 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACTL10Q5JWF8 245 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SPANXN5Q5MJ07 72 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ATPAF1Q5TC12 328 aaPredicted RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 DDI2Q5TDH0 399 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ATG16L1Q676U5 607 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SPOPLQ6IQ16 392 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM180BQ6P0A1 224 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TTC23LQ6PF05 361 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 HEPN1Q6WQI6 88 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ITPRIPQ8IWB1 547 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR5AS1Q8N127 324 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 COX18Q8N8Q8 333 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBAC2Q8NBM4 344 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR10X1Q8NGY0 326 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR5K1Q8NHB7 308 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 PSMA8Q8TAA3 256 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM57AQ8TBR7 257 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 NOC3LQ8WTT2 800 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 C2orf15Q8WU43 125 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRIM43Q96BQ3 446 aaPredicted RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 BPIFA2Q96DR5 249 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC136Q96JN2 1154 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ITPAQ9BY32 194 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 RTFDC1Q9BY42 306 aaPredicted RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 PRRG4Q9BZD6 226 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC25A31Q9H0C2 315 aa-2.42□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms