RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MED6O75586 246 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 DFFBO76075 338 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 SCAF4O95104 1147 aaKnown RBP11.4□□□□□ -0.59
LIMS1-205ENST00000410093 LY86O95711 162 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 PTAFRP25105 342 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 PRDX2P32119 198 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 OR3A1P47881 315 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 CAV2P51636 162 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 TDGF1P3P51864 188 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 RBPJQ06330 500 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 TMEM30BQ3MIR4 351 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 KRBOX4Q5JUW0 171 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF66Q6ZN08 573 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.59
LIMS1-205ENST00000410093 GNPNAT1Q96EK6 184 aaPredicted RBP11.4□□□□□ -0.59
LIMS1-205ENST00000410093 MSL2Q9HCI7 577 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.59
LIMS1-205ENST00000410093 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 VSTM5A8MXK1 200 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 C12orf77C9JDV5 145 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 DANCRP0C864 163 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 GABRA2P47869 451 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 ARHGDIBP52566 201 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 COL10A1Q03692 680 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 PXDC1Q5TGL8 231 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 PRAMEF6Q5VXH4 476 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 TMEM108Q6UXF1 575 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 STX12Q86Y82 276 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 SVBPQ8N300 66 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 DRAM1Q8N682 238 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 LFNGQ8NES3 379 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 CD300LFQ8TDQ1 290 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 IL19Q9UHD0 177 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF835Q9Y2P0 537 aa11.39□□□□□ -0.59
LIMS1-205ENST00000410093 ZSCAN5BA6NJL1 495 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 LGALS8O00214 317 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 ITGB1BP1O14713 200 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 LHBP01229 141 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 HBZP02008 142 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 OR8U9P0C7N5 309 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 PSG2P11465 335 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 MIDNQ504T8 468 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 C10orf91Q5T1B1 145 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 BTNL8Q6UX41 500 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 TMEM252Q8N6L7 170 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 BPIFCQ8NFQ6 507 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 OR8U1Q8NH10 309 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 TMEM171Q8WVE6 324 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 COQ2Q96H96 371 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 HSD17B10Q99714 261 aaKnown RBP11.38□□□□□ -0.59
LIMS1-205ENST00000410093 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 DUSP13Q9UII6 198 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 RNF115Q9Y4L5 304 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 MMP24Q9Y5R2 645 aa11.38□□□□□ -0.59
LIMS1-205ENST00000410093 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 TOR1AO14656 332 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 TNFSF12O43508 249 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 SSSCA1O60232 199 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 AKR1C2P52895 323 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 POLR2GP62487 172 aaKnown RBP eCLIP11.37□□□□□ -0.59
LIMS1-205ENST00000410093 AESQ08117 197 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 MST1LQ2TV78 715 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 DPPA3Q6W0C5 159 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 DOLPP1Q86YN1 238 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 PRR18Q8N4B5 295 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 Q8TCH9 128 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 FAM222BQ8WU58 562 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 GPR146Q96CH1 333 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
LIMS1-205ENST00000410093 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 NGBQ9NPG2 151 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 UFSP2Q9NUQ7 469 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 OR6C3Q9NZP0 311 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 JPT1Q9UK76 154 aa11.37□□□□□ -0.59
LIMS1-205ENST00000410093 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
LIMS1-205ENST00000410093 BTBD17A6NE02 478 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 WNT9BO14905 357 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 CHST1O43916 411 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF737O75373 536 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 APOC3P02656 99 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 CD40P25942 277 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 NHLH2Q02577 135 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF561Q8N587 486 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 NARS2Q96I59 477 aaKnown RBP11.36□□□□□ -0.59
LIMS1-205ENST00000410093 OR2V2Q96R30 315 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 SMIM3Q9BZL3 60 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 FAM234AQ9H0X4 552 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 HIPK2Q9H2X6 1198 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 JKAMPQ9P055 326 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 FZR1Q9UM11 496 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 GAB2Q9UQC2 676 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 PPP1R3CQ9UQK1 317 aa11.36□□□□□ -0.59
LIMS1-205ENST00000410093 K7N7A8 449 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms