RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TMEM106BQ9NUM4 274 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 OR2W1Q9Y3N9 320 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 TRAV39A0A0B4J263 110 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 TRAV38-1A0A0B4J264 116 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 H7C2Y5 167 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 I3L521 148 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 ITGB1BP1O14713 200 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 RGS11O94810 467 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 CD8AP01732 235 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 LINC00614P0C842 121 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 DANCRP0C864 163 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 GNRHRP30968 328 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 GABRA2P47869 451 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 PIGPP57054 158 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 FXYD4P59646 89 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 DCAF12L2Q5VW00 463 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 WDR73Q6P4I2 378 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 LRTM2Q8N967 370 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 ZNRF1Q8ND25 227 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 OR13A1Q8NGR1 328 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 TOMM40LQ969M1 308 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 C2orf88Q9BSF0 95 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 CLEC4MQ9H2X3 399 aaPredicted RBP4.59□□□□□ -1.67
EPHA4-202ENST00000409854 NAA60Q9H7X0 242 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 KCNIP1Q9NZI2 227 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 OR1A1Q9P1Q5 309 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 RELNP78509 3460 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 HRNRQ86YZ3 2850 aaPredicted RBP4.59□□□□□ -1.68
EPHA4-202ENST00000409854 PPIAL4EA0A075B759 164 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 IGHV1-69-2A0A0G2JMI3 117 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 A0A1W2PPR1 153 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 ODAMA1E959 279 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 PPIAL4DF5H284 164 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 SMLR1H3BR10 107 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 SCGB1D2O95969 90 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 PPIAL4FP0DN26 164 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 HTD2P86397 168 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 MSMO1Q15800 293 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 ANKRD55Q3KP44 614 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 SGPP2Q8IWX5 399 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 CCDC71LQ8N9Z2 235 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 UXS1Q8NBZ7 420 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 C14orf79Q96F83 325 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 HYLS1Q96M11 299 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 LINC00574Q9H8X3 128 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 RAB18Q9NP72 206 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 KAAG1Q9UBP8 84 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 PPIAL4AQ9Y536 164 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 SPTA1P02549 2419 aa4.59□□□□□ -1.68
EPHA4-202ENST00000409854 ACACBO00763 2458 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 A0A1B0GW55 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 NKX6-3A6NJ46 265 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 MARCH11A6NNE9 402 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GPR31O00270 319 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 HBZP02008 142 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GYPAP02724 150 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 PRB1P04280 392 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L2P0CJ85 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L3P0CJ86 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L4P0CJ87 422 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L5P0CJ88 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L6P0CJ89 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L7P0CJ90 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 RRASP10301 218 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 MRPS11P82912 194 aaKnown RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM187Q14656 261 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SLC25A24Q6NUK1 477 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4L9Q6RFH8 374 aaPredicted RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF818PQ6ZRF7 136 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 KCTD9Q7L273 389 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 TCF23Q7RTU1 214 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 BVESQ8NE79 360 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 OR1L1Q8NH94 360 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 COQ8AQ8NI60 647 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 MRGPRDQ8TDS7 321 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 RTN4IP1Q8WWV3 396 aaPredicted RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 CORO2AQ92828 525 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GALMQ96C23 342 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 WDR89Q96FK6 387 aaPredicted RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SUCNR1Q9BXA5 334 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 DUX4Q9UBX2 424 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 ICE1Q9Y2F5 2266 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 F2RL2O00254 374 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 FCN3O75636 299 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 RP2O75695 350 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SIX6O95475 246 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GZMHP20718 246 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SLC9A3R2Q15599 337 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 ABCA11PQ4W5N1 156 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 FAM216BQ8N7L0 139 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 TPRX1Q8N7U7 411 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 OR11H4Q8NGC9 324 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 OR10V1Q8NGI7 309 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 OR2T35Q8NGX2 323 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 CASTOR1Q8WTX7 329 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 CCL13Q99616 98 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SLC5A7Q9GZV3 580 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 RDH8Q9NYR8 311 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 OR6C3Q9NZP0 311 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms