RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MYF6P23409 242 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
CBX3-203ENST00000409747 RPS27AP62979 156 aaKnown RBP11.55□□□□□ -0.56
CBX3-203ENST00000409747 C1orf100Q5SVJ3 147 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 FAM71F2Q6NXP2 309 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 C4orf3Q8WVX3 66 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 KCTD7Q96MP8 289 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 ZNF251Q9BRH9 671 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 TMED9Q9BVK6 235 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 HLA-DRB1P01911 266 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 SLC2A2P11168 524 aaPredicted RBP11.55□□□□□ -0.56
CBX3-203ENST00000409747 PSMB8P28062 276 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 ACTBP60709 375 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 SPHARQ15513 63 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 HMGN3Q15651 99 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 HSD17B12Q53GQ0 312 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 ZNF833PQ6ZTB9 187 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 MOB1BQ7L9L4 216 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 LRRTM1Q86UE6 522 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 B9D2Q9BPU9 175 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 NABP2Q9BQ15 211 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 SULT4A1Q9BR01 284 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
CBX3-203ENST00000409747 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 KIAA1456Q9P272 454 aa11.55□□□□□ -0.56
CBX3-203ENST00000409747 NBR2O15453 112 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 HTR2CP28335 458 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 INSL4Q14641 139 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 DEFB136Q30KP8 78 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 FAM27D1Q5T7N8 215 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 TM2D1Q9BX74 207 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 CHMP1AQ9HD42 196 aaPredicted RBP11.54□□□□□ -0.56
CBX3-203ENST00000409747 PIPOXQ9P0Z9 390 aa11.54□□□□□ -0.56
CBX3-203ENST00000409747 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 PTGES3LE9PB15 166 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 SLC22A1O15245 554 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 BPNT1O95861 308 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
CBX3-203ENST00000409747 SRMP19623 302 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 MED22Q15528 200 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 OR10K2Q6IF99 312 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 C6orf201Q7Z4U5 140 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 CEACAM19Q7Z692 300 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 OR6M1Q8NGM8 313 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 FAAP24Q9BTP7 215 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 OR51J1Q9H342 316 aa11.53□□□□□ -0.56
CBX3-203ENST00000409747 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
CBX3-203ENST00000409747 RAB29O14966 203 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 FHL3Q13643 280 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 UFD1Q92890 307 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.56
CBX3-203ENST00000409747 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 GHITMQ9H3K2 345 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.52□□□□□ -0.56
CBX3-203ENST00000409747 PARP11Q9NR21 331 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 MGAT4AQ9UM21 535 aa11.52□□□□□ -0.56
CBX3-203ENST00000409747 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 ATP6V0E1O15342 81 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 NAPSAO96009 420 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 UCHL1P09936 223 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 BLVRBP30043 206 aaPredicted RBP11.52□□□□□ -0.57
CBX3-203ENST00000409747 RANBP1P43487 201 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 OR3A3P47888 321 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 LUMP51884 338 aaPredicted RBP11.52□□□□□ -0.57
CBX3-203ENST00000409747 UNC119Q13432 240 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 C5orf64Q2M2E5 130 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 C11orf87Q6NUJ2 197 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 NPBQ8NG41 125 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 SETD6Q8TBK2 473 aa11.52□□□□□ -0.57
CBX3-203ENST00000409747 LSM2Q9Y333 95 aaKnown RBP11.52□□□□□ -0.57
CBX3-203ENST00000409747 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 NDUFA3O95167 84 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 PPIFP30405 207 aaKnown RBP11.51□□□□□ -0.57
CBX3-203ENST00000409747 TRAM1Q15629 374 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 CYYR1Q96J86 154 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 NICN1Q9BSH3 213 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 SLC23A1Q9UHI7 598 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
CBX3-203ENST00000409747 TRBV6-6A0A0A6YYG2 114 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 IGHV7-81A0A0B4J1V7 117 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms