RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C18orf12Q96KH6 178 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 RSG1Q9BU20 258 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 OPN3Q9H1Y3 402 aaPredicted RBP11.42□□□□□ -0.58
COL6A2-204ENST00000409416 HSF4Q9ULV5 492 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 YIF1AO95070 293 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 RPL23AP62750 156 aaKnown RBP11.42□□□□□ -0.58
COL6A2-204ENST00000409416 FAM58AQ8N1B3 248 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 TMEM252Q8N6L7 170 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 C10orf35Q96D05 121 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 SPIN2AQ99865 258 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 SPIN2BQ9BPZ2 258 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 COL5A1P20908 1838 aaPredicted RBP11.42□□□□□ -0.58
COL6A2-204ENST00000409416 MALRD1Q5VYJ5 2156 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 APELAP0DMC3 54 aa11.42□□□□□ -0.58
COL6A2-204ENST00000409416 RBFOX3A6NFN3 312 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 TRDCB7Z8K6 153 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
COL6A2-204ENST00000409416 KLK10O43240 276 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 Q6ZPA2 131 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 VKORC1L1Q8N0U8 176 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 SCGB1C1Q8TD33 95 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 GALNT14Q96FL9 552 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 GINS3Q9BRX5 216 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 SLC25A31Q9H0C2 315 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 ZNF703Q9H7S9 590 aaPredicted RBP11.41□□□□□ -0.58
COL6A2-204ENST00000409416 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
COL6A2-204ENST00000409416 IFNA17P01571 189 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 RAB11AP62491 216 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 ETFRF1Q6IPR1 90 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 CYB561D1Q8N8Q1 229 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 APOBEC3DQ96AK3 386 aaPredicted RBP11.41□□□□□ -0.58
COL6A2-204ENST00000409416 FER1L6-AS2Q96M78 137 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 PLEKHF2Q9H8W4 249 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 PIEZO1Q92508 2521 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
COL6A2-204ENST00000409416 H3BQ15 152 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 CYTIPO60759 359 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 CLN5O75503 358 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 HEXAP06865 529 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 GCH1P30793 250 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 HIST1H3AP68431 136 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 HIST2H3PS2Q5TEC6 136 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 HIST2H3AQ71DI3 136 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 OR52L2PQ8NGH6 319 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 TMEM68Q96MH6 324 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 GLRX2Q9NS18 164 aa11.41□□□□□ -0.58
COL6A2-204ENST00000409416 A0A087X0M5 115 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 A0A1B0GX30 115 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 CEBPZOSA8MTT3 80 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 CA11O75493 328 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 EIF2S3P41091 472 aaKnown RBP11.4□□□□□ -0.58
COL6A2-204ENST00000409416 FOXF2Q12947 444 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 TBC1D28Q2M2D7 210 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 DTD1Q8TEA8 209 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 IFNA5P01569 189 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 SFTPCP11686 197 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 RND3P61587 244 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
COL6A2-204ENST00000409416 MPV17LQ2QL34 196 aa11.4□□□□□ -0.58
COL6A2-204ENST00000409416 SF3B5Q9BWJ5 86 aaKnown RBP11.4□□□□□ -0.58
COL6A2-204ENST00000409416 OR5H1A6NKK0 313 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 FAM157AC9JC47 383 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 GNG10P50151 68 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 UBE2G2P60604 165 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 SELENOHQ8IZQ5 122 aaKnown RBP11.4□□□□□ -0.59
COL6A2-204ENST00000409416 HPSE2Q8WWQ2 592 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 RAB39BQ96DA2 213 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 PSG11Q9UQ72 335 aa11.4□□□□□ -0.59
COL6A2-204ENST00000409416 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.59
COL6A2-204ENST00000409416 LOC102723996A0A087X1L8 192 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 UBE2L5PA0A1B0GUS4 154 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 G6PCP35575 357 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 ERVFRD-1P60508 538 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 PPP1CBP62140 327 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 FOXO1Q12778 655 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 MRPL49Q13405 166 aaKnown RBP11.39□□□□□ -0.59
COL6A2-204ENST00000409416 TRA2AQ13595 282 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL6A2-204ENST00000409416 TMEM211Q6ICI0 200 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 OR1L1Q8NH94 360 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 GTF3AQ92664 365 aaKnown RBP11.39□□□□□ -0.59
COL6A2-204ENST00000409416 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF391Q9UJN7 358 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 WSB1Q9Y6I7 421 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 SLC31A2O15432 143 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 LHX2P50458 406 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 RHEBQ15382 184 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 RPRMLQ8N4K4 120 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 OR2D2Q9H210 308 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
COL6A2-204ENST00000409416 TSTD3H0UI37 97 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms