RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RBP4P02753 201 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 OR5H8P0DN80 308 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 FOSL1P15407 271 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 ZBTB25P24278 435 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 HTD2P86397 168 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 CDK10Q15131 360 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 SRSF7Q16629 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 LDLRAD2Q5SZI1 272 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 TRIQKQ629K1 86 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 C1orf122Q6ZSJ8 110 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 ZNF554Q86TJ5 538 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 CLEC7AQ9BXN2 247 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 C11orf54Q9H0W9 315 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 HEXA-AS1Q9H8Q6 139 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 NECAP2Q9NVZ3 263 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 JPT1Q9UK76 154 aa11.48□□□□□ -0.57
CHRNA1-204ENST00000409323 INAFM1C9JVW0 142 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 FCGR2CP31995 323 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 FXYD4P59646 89 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 SSBP1Q04837 148 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 DYRK1AQ13627 763 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 TOMM5Q8N4H5 51 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 OR4C16Q8NGL9 310 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 OR13D1Q8NGV5 346 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 OR56B4Q8NH76 319 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 ABHD14BQ96IU4 210 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 DMRTB1Q96MA1 342 aa11.47□□□□□ -0.57
CHRNA1-204ENST00000409323 IGKV1D-13A0A0B4J2D9 117 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 ANKRD20A5PA0PJZ0 165 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 J3QR06 171 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 TOR1AO14656 332 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 RAB3DO95716 219 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 OR8U9P0C7N5 309 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 IGKV1-13P0DP09 117 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 AADACP22760 399 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 INPP1P49441 399 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 TAS2R46P59540 309 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 TAS2R19P59542 299 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 TSPAN5P62079 268 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 KLF9Q13886 244 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 RNASE10Q5GAN6 216 aaKnown RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 NCR3LG1Q68D85 454 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 CCBE1Q6UXH8 406 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 NRARPQ7Z6K4 114 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 H1FOOQ8IZA3 346 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 TMEM229BQ8NBD8 167 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 OR10A7Q8NGE5 316 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 OR8U1Q8NH10 309 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 SLC6A7Q99884 636 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 C7orf50Q9BRJ6 194 aaKnown RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 ZNF2Q9BSG1 426 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 UNKLQ9H9P5 680 aaKnown RBP11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 RAB9BQ9NP90 201 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 MCUBQ9NWR8 336 aa11.46□□□□□ -0.57
CHRNA1-204ENST00000409323 HIVEP2P31629 2446 aa11.46□□□□□ -0.58
CHRNA1-204ENST00000409323 A0A087X0M5 115 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 A0A1B0GX30 115 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 NPFFO15130 113 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 LYRM1O43325 122 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 YPEL1O60688 119 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 AMY2AP04746 511 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 CSF1P09603 554 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 SLC6A1P30531 599 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 SAA4P35542 130 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 REG1BP48304 166 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 SCGB2B2Q4G0G5 96 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OVCH2Q7RTZ1 564 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 TMEM17Q86X19 198 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OR2AK2Q8NG84 335 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OR4P4Q8NGL7 312 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OR10X1Q8NGY0 326 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 NANPQ8TBE9 248 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 YPEL2Q96QA6 119 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 ABHD14AQ9BUJ0 271 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF107Q9UII5 783 aaPredicted RBP11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 RBM7Q9Y580 266 aaKnown RBP11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 HILPDAQ9Y5L2 63 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 ODF3BA8MYP8 253 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 AKAIN1P0CW23 69 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 CD34P28906 385 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 UBE2E1P51965 193 aa11.45□□□□□ -0.58
CHRNA1-204ENST00000409323 HLA-DRB5Q30154 266 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms