RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 SUCNR1Q9BXA5 334 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 TINAGL1Q9GZM7 467 aaPredicted RBP16.7■□□□□ 0.26
VSX1-203ENST00000409285 RDH8Q9NYR8 311 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 PSG11Q9UQ72 335 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 NAV3Q8IVL0 2385 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 SONP18583 2426 aaKnown RBP16.69■□□□□ 0.26
VSX1-203ENST00000409285 ODF3BA8MYP8 253 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 M0QYG6 137 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 AVPP01185 164 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 IGLV1-47P01700 117 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 UBE2E1P51965 193 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 UTF1Q5T230 341 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 ZNF626Q68DY1 528 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 ZNF57Q68EA5 555 aaPredicted RBP16.69■□□□□ 0.26
VSX1-203ENST00000409285 C1orf229Q6ZS94 237 aaPredicted RBP16.69■□□□□ 0.26
VSX1-203ENST00000409285 SLC25A48Q6ZT89 311 aaKnown RBP16.69■□□□□ 0.26
VSX1-203ENST00000409285 ABHD12Q8N2K0 398 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 TEX29Q8N6K0 151 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 OR10V1Q8NGI7 309 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 PALMDQ9NP74 551 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 SLC2A8Q9NY64 477 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 ZNF69Q9UC07 566 aa16.69■□□□□ 0.26
VSX1-203ENST00000409285 J3QR06 171 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 FSHBP01225 129 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 DLX1P56177 255 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 FAM53AQ6NSI3 398 aaPredicted RBP16.68■□□□□ 0.26
VSX1-203ENST00000409285 TMEM17Q86X19 198 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 OR2AK2Q8NG84 335 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 AGMATQ9BSE5 352 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 ABHD14AQ9BUJ0 271 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 HRASLSQ9HDD0 168 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 TMEM160Q9NX00 188 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 OR2W1Q9Y3N9 320 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 ZFHX3Q15911 3703 aa16.68■□□□□ 0.26
VSX1-203ENST00000409285 FAM172BPA6NC97 362 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 NAP1L6A6NFF2 107 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 IFNA6P05013 189 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 ZNF735P0CB33 412 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 NFYAP23511 347 aaPredicted RBP16.67■□□□□ 0.26
VSX1-203ENST00000409285 FCGR2CP31995 323 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 RAB7AP51149 207 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 ZNF134P52741 427 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 LHFPL1Q86WI0 220 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 PNKDQ8N490 385 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 OR6F1Q8NGZ6 308 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 GHITMQ9H3K2 345 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 HIVEP2P31629 2446 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 CENPVL3A0A0U1RRI6 287 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 PPYP01298 95 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 AMY2AP04746 511 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 PRRX1P54821 245 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 BPIFB3P59826 476 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 IFITM3Q01628 133 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 KLRD1Q13241 179 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 CT45A1Q5HYN5 189 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 CT45A3Q8NHU0 189 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 LEAP2Q969E1 77 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 LHX4Q969G2 390 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 SLC6A7Q99884 636 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 PRRT1Q99946 306 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 PARP12Q9H0J9 701 aaKnown RBP16.67■□□□□ 0.26
VSX1-203ENST00000409285 C11orf54Q9H0W9 315 aaPredicted RBP16.67■□□□□ 0.26
VSX1-203ENST00000409285 MMP28Q9H239 520 aa16.67■□□□□ 0.26
VSX1-203ENST00000409285 TRAV40A0A0B4J280 105 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 A8MV72 311 aaPredicted RBP16.66■□□□□ 0.26
VSX1-203ENST00000409285 DISC1C4P0D8 188 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 COX7A1P24310 79 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 ZNF137PP52743 207 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 TSPAN5P62079 268 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 ASAH1Q13510 395 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 HLA-DRB5Q30154 266 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 FAAP20Q6NZ36 180 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 OR4P4Q8NGL7 312 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 OR56B4Q8NH76 319 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 MOB3AQ96BX8 217 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 SMR3AQ99954 134 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 ZNF2Q9BSG1 426 aaPredicted RBP16.66■□□□□ 0.26
VSX1-203ENST00000409285 IFI27L2Q9H2X8 130 aa16.66■□□□□ 0.26
VSX1-203ENST00000409285 IGHV1-69DA0A0B4J2H0 117 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 CENPXA8MT69 81 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 TOR1AO14656 332 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 PLA2G10O15496 165 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 IGHV1-69P01742 117 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 AADACP22760 399 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 GNG10P50151 68 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 MIDNQ504T8 468 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 KLF17Q5JT82 389 aaPredicted RBP16.65■□□□□ 0.26
VSX1-203ENST00000409285 AADACL3Q5VUY0 350 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 CREB3L1Q96BA8 519 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 TBC1D24Q9ULP9 559 aa16.65■□□□□ 0.26
VSX1-203ENST00000409285 TBL2Q9Y4P3 447 aaKnown RBP16.65■□□□□ 0.26
VSX1-203ENST00000409285 AMMECR1Q9Y4X0 333 aaPredicted RBP16.65■□□□□ 0.26
VSX1-203ENST00000409285 SLC31A2O15432 143 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 LY6G6DO95868 133 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 ECI1P42126 302 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 PRB3Q04118 309 aaPredicted RBP16.64■□□□□ 0.25
VSX1-203ENST00000409285 MSMO1Q15800 293 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 CLEC9AQ6UXN8 241 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 LDLRAD3Q86YD5 345 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms