RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 Q6ZS52 159 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TMPRSS2O15393 492 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 MYF5P13349 255 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.61
RNF43-201ENST00000407977 CEACAM21Q3KPI0 293 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 ZNF205O95201 554 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 HLA-DRB1P01911 266 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
RNF43-201ENST00000407977 BHLHA15Q7RTS1 189 aaPredicted RBP11.27□□□□□ -0.61
RNF43-201ENST00000407977 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 TMEM140Q9NV12 185 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 KLK2P20151 261 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 HYAL1Q12794 435 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 IZUMO4Q1ZYL8 232 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 INSIG2Q9Y5U4 225 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 UPK3AO75631 287 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 C1QL1O75973 258 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 VENTXO95231 258 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 COA4Q9NYJ1 87 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
RNF43-201ENST00000407977 KBTBD11O94819 623 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 RHOVQ96L33 236 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 F5P12259 2224 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 MT-CO3P00414 261 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 LIFP15018 202 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 FAM222BQ8WU58 562 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
RNF43-201ENST00000407977 IGHV1OR15-9A0A0B4J2B8 117 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 UCP3P55916 312 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 PSMG3Q9BT73 122 aaPredicted RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 NPTNQ9Y639 398 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 RECKO95980 971 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 IGHV3-13P01766 116 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 IGHV3-7P01780 117 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 COMPP49747 757 aaPredicted RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 OR8B2Q96RD0 313 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 LHX9Q9NQ69 397 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 MGST3O14880 152 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 PRF1P14222 555 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 WNT5AP41221 380 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 PRSS12P56730 875 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 MOGAT3Q86VF5 341 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 WDR54Q9H977 334 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 WNT16Q9UBV4 365 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 HRKO00198 91 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 LCN2P80188 198 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
RNF43-201ENST00000407977 SPSB4Q96A44 273 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 ARAP2Q8WZ64 1704 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 A8MXK9 166 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 ZNF645Q8N7E2 425 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 ABHD3Q8WU67 409 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 ARRDC1-AS1Q9H2J1 176 aa11.25□□□□□ -0.61
RNF43-201ENST00000407977 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 GCSAMQ8N6F7 178 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 GCM2O75603 506 aaPredicted RBP11.24□□□□□ -0.61
RNF43-201ENST00000407977 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 CCDC144NLQ6NUI1 221 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 MGPP08493 103 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
RNF43-201ENST00000407977 HIKESHIQ53FT3 197 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 ZNF506Q5JVG8 444 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 MBD1Q9UIS9 605 aaPredicted RBP11.24□□□□□ -0.61
RNF43-201ENST00000407977 LINC01565O15544 149 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 COL9A1P20849 921 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 MC5RP33032 325 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
RNF43-201ENST00000407977 POC1AQ8NBT0 407 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 ZNF721Q8TF20 911 aa11.24□□□□□ -0.61
RNF43-201ENST00000407977 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms