RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 FAM209BQ5JX69 171 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 BPIFCQ8NFQ6 507 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 KLHDC3Q9BQ90 382 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 MAP1LC3BQ9GZQ8 125 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 SH2D2AQ9NP31 389 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 PRR13Q9NZ81 148 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 ONECUT1Q9UBC0 465 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 WSB1Q9Y6I7 421 aa4.06□□□□□ -1.76
PCDH11X-207ENST00000406881 ALPK2Q86TB3 2170 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 IGKV1-9A0A0C4DH69 117 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF729A6NN14 1252 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 LEUTXA8MZ59 168 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 COX7A2P2O60397 106 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR5G3P0C626 314 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SFTA3P0C7M3 94 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 MUC1P15941 1255 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 KLK2P20151 261 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 PPP1CCP36873 323 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CSN1S1P47710 185 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ASCL1P50553 236 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SERF2P84101 59 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM187Q14656 261 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SRSF7Q16629 238 aaKnown RBP eCLIP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 C9orf106Q8NAJ2 232 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 KDF1Q8NAX2 398 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CLRN3Q8NCR9 226 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR1L4Q8NGR5 311 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR13D1Q8NGV5 346 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 C2CD4CQ8TF44 421 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 PLPPR2Q96GM1 343 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 LYZL4Q96KX0 146 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ABHD14AQ9BUJ0 271 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SEBOXQ9HB31 216 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 C1RLQ9NZP8 487 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 RNF115Q9Y4L5 304 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM218A2RU14 115 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 B9A039 149 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 K7N7A8 449 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR7C2O60412 319 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CLDN14O95500 239 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 IL18BPO95998 194 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 S100A8P05109 93 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 FBP1P09467 338 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR4A8P0C604 315 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 BRS3P32247 399 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 MC5RP33032 325 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SULT1A2P50226 295 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ATP5IP56385 69 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 RP1P56715 2156 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 UBE2G1P62253 170 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 NCR3LG1Q68D85 454 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 RALGAPA1Q6GYQ0 2036 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 VWA1Q6PCB0 445 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 DHRS11Q6UWP2 260 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 DOLPP1Q86YN1 238 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZFP82Q8N141 532 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF561Q8N587 486 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 TMEM252Q8N6L7 170 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR1L8Q8NGR8 309 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF596Q8TC21 504 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM216AQ8WUB2 273 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SPSB4Q96A44 273 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 FLYWCH2Q96CP2 140 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 MEGF10Q96KG7 1140 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF714Q96N38 554 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SLX1AQ9BQ83 275 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 RSRP1Q9BUV0 290 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZDHHC11Q9H8X9 412 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 MANBALQ9NQG1 85 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CALYQ9NYX4 217 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 THYN1Q9P016 225 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 PLXNB3Q9ULL4 1909 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM96BQ9Y3D0 163 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 KCNMB2Q9Y691 235 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM186AA6NE01 2351 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 TRAV39A0A0B4J263 110 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 IGHV2OR16-5A0A0B4J2B6 119 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 PPP5D1E7EU14 171 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 IGHG3P01860 377 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 MMP7P09237 267 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 G0S2P27469 103 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 BTCP35070 178 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CDC34P49427 236 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 H2BFSP57053 126 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ERVFRD-1P60508 538 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SPCS3P61009 180 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 GNB2P62879 340 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 IFITM2Q01629 132 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 PNRC1Q12796 327 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 RSPO4Q2I0M5 234 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 NHLRC3Q5JS37 347 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF660Q6AZW8 331 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 DHRS7BQ6IAN0 325 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 CCDC144NLQ6NUI1 221 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 BTNL3Q6UXE8 466 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF826PQ6ZT77 177 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 SELENOHQ8IZQ5 122 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 UBAC2Q8NBM4 344 aa4.05□□□□□ -1.76
PCDH11X-207ENST00000406881 OR10G4Q8NGN3 311 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms