RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 MMP9P14780 707 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-204ENST00000406516 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 STX12Q86Y82 276 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 H1FOOQ8IZA3 346 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-204ENST00000406516 BTBD17A6NE02 478 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 H0YL77 283 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 NQO2P16083 231 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 CTAG1AP78358 180 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 IL24Q13007 206 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 CYB561D1Q8N8Q1 229 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 OR8G5Q8NG78 346 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 SMDT1Q9H4I9 107 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
LIMK2-204ENST00000406516 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF727A8MUV8 499 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 DEGS1O15121 323 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 PRB1P04280 392 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
LIMK2-204ENST00000406516 ICAM4Q14773 271 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 Q6ZRM9 215 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF295-AS1Q8N0V1 137 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 GTF3AQ92664 365 aaKnown RBP12.88□□□□□ -0.35
LIMK2-204ENST00000406516 RAB39BQ96DA2 213 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 PPP1R3CQ9UQK1 317 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
LIMK2-204ENST00000406516 SIRPB1O00241 398 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 IAPPP10997 89 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 TAS2R30P59541 319 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 RPL23AP62750 156 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 RBM7Q9Y580 266 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 MMP24Q9Y5R2 645 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 TRBV6-6A0A0A6YYG2 114 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 IL18BPO95998 194 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 S100A8P05109 93 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 TAGLN2P37802 199 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 UBE2KP61086 200 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 TLE4Q04727 773 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF880Q6PDB4 577 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 MDP1Q86V88 176 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 OR51I2Q9H344 312 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
LIMK2-204ENST00000406516 A0A1B0GU03 582 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 TXNL1O43396 289 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
LIMK2-204ENST00000406516 IFNA5P01569 189 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 IGKV1-39P01597 117 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 IGKV1D-39P04432 117 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 SMIM6P0DI80 62 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 B2MP61769 119 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 OR8G1Q15617 311 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 CLDND2Q8NHS1 167 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 CABLES2Q9BTV7 478 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 RSG1Q9BU20 258 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 METTL1Q9UBP6 276 aaKnown RBP12.86□□□□□ -0.35
LIMK2-204ENST00000406516 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 KIAA1324LA8MWY0 1029 aaPredicted RBP12.86□□□□□ -0.35
LIMK2-204ENST00000406516 DFFBO76075 338 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
LIMK2-204ENST00000406516 J3QT63 122 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 IGHV2-5P01817 119 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
LIMK2-204ENST00000406516 S100A12P80511 92 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 TESK1Q15569 626 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 SP5Q6BEB4 398 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-204ENST00000406516 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 Q6P435 159 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 OR1K1Q8NGR3 316 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 MUCL1Q96DR8 90 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 MALSU1Q96EH3 234 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 PKIBQ9C010 78 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 A0A1W2PR80 420 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 METTL15P1P0C7V9 234 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 RAB2AP61019 212 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 DLK1P80370 383 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
LIMK2-204ENST00000406516 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
LIMK2-204ENST00000406516 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms