RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 SAMD13Q5VXD3 122 aa10.34□□□□□ -0.75
HMGB1-206ENST00000405805 OR2M3Q8NG83 312 aa10.34□□□□□ -0.75
HMGB1-206ENST00000405805 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
HMGB1-206ENST00000405805 A0A0J9YW62 118 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 PPYP01298 95 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 NPBWR2P48146 333 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 AGBL5Q8NDL9 886 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 PRSS50Q9UI38 385 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 TIMM10BQ9Y5J6 103 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 C2orf16Q68DN1 1984 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
HMGB1-206ENST00000405805 UNQ5815/PRO19632Q6UWF5 114 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
HMGB1-206ENST00000405805 RSG1Q9BU20 258 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 OR1A1Q9P1Q5 309 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 FCGR3AP08637 254 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 BMI1P35226 326 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 KLF3P57682 345 aaPredicted RBP10.33□□□□□ -0.76
HMGB1-206ENST00000405805 BAXQ07812 192 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 TMEM183AQ8IXX5 376 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 M0QZ24 198 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 PDCD6O75340 191 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 ZNF253O75346 499 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 SCTP09683 121 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 SUMO3P55854 103 aaPredicted RBP10.33□□□□□ -0.76
HMGB1-206ENST00000405805 CFHR1Q03591 330 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 C3AR1Q16581 482 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 ABHD17BQ5VST6 288 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 PLEKHF2Q9H8W4 249 aa10.33□□□□□ -0.76
HMGB1-206ENST00000405805 IGKV3D-11A0A0A0MRZ8 115 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 MPPED1O15442 326 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 SELEP16581 610 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 OTX1P32242 354 aaPredicted RBP10.32□□□□□ -0.76
HMGB1-206ENST00000405805 ECI1P42126 302 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 STUMQ69YW2 141 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 IFI44Q8TCB0 444 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 ZPBPQ9BS86 351 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 PCED1AQ9H1Q7 454 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 B3GAT1Q9P2W7 334 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 VAMP5O95183 116 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 MELTFP08582 738 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 PCBD1P61457 104 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 TMED3Q9Y3Q3 217 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 UBE2L5PA0A1B0GUS4 154 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 E9PLN8 166 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 TSPAN7P41732 249 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
HMGB1-206ENST00000405805 MSMO1Q15800 293 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 NIT1Q86X76 327 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 MRGPRFQ96AM1 343 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 WNT10AQ9GZT5 417 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 BARX1Q9HBU1 254 aaPredicted RBP10.32□□□□□ -0.76
HMGB1-206ENST00000405805 Q9N2K0 584 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 PRR14LQ5THK1 2151 aa10.32□□□□□ -0.76
HMGB1-206ENST00000405805 NXPH2O95156 264 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
HMGB1-206ENST00000405805 ANOS1P23352 680 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 CCL20P78556 96 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 COL10A1Q03692 680 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 EDDM3AQ14507 147 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 IGFBP7Q16270 282 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 TPTE2P1Q5T6R2 138 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 RNASEKQ6P5S7 137 aaKnown RBP10.31□□□□□ -0.76
HMGB1-206ENST00000405805 LHFPL2Q6ZUX7 228 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 C16orf82Q7Z2V1 217 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 SPSB1Q96BD6 273 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 OR2D2Q9H210 308 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 TECRQ9NZ01 308 aaKnown RBP10.31□□□□□ -0.76
HMGB1-206ENST00000405805 PLA2G3Q9NZ20 509 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 TRANK1O15050 2925 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 A8MWP6 167 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 DEGS1O15121 323 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 CNIH1O95406 144 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 TDGF1P3P51864 188 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 SLC25A47Q6Q0C1 308 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 OR10D3Q8NH80 312 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 R3HDM4Q96D70 268 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 UHRF2Q96PU4 802 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 SLC25A22Q9H936 323 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 LPAR2Q9HBW0 351 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 OBP2BQ9NPH6 170 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 ZNF331Q9NQX6 463 aaPredicted RBP10.31□□□□□ -0.76
HMGB1-206ENST00000405805 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 UQCR10Q9UDW1 63 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 LTBP2Q14767 1821 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 NEURL1O76050 574 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 HAND1O96004 215 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 HOXC12P31275 282 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 P2RY1P47900 373 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 ZP4Q12836 540 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 KMT5CQ86Y97 462 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
HMGB1-206ENST00000405805 FAM131CQ96AQ9 280 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms