RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 OVCH2Q7RTZ1 564 aa27.09■■□□□ 1.93
CSNK1E-204ENST00000403904 ZNF439Q8NDP4 499 aa27.09■■□□□ 1.93
CSNK1E-204ENST00000403904 TAS2R8Q9NYW2 309 aa27.09■■□□□ 1.93
CSNK1E-204ENST00000403904 ZNF69Q9UC07 566 aa27.09■■□□□ 1.93
CSNK1E-204ENST00000403904 ZFHX3Q15911 3703 aa27.09■■□□□ 1.93
CSNK1E-204ENST00000403904 NFYAP23511 347 aaPredicted RBP27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 PPP5CP53041 499 aa27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 CT45A1Q5HYN5 189 aa27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 ZNF626Q68DY1 528 aa27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 CT45A3Q8NHU0 189 aa27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 ZNF107Q9UII5 783 aaPredicted RBP27.08■■□□□ 1.93
CSNK1E-204ENST00000403904 ANKRD20A5PA0PJZ0 165 aa27.07■■□□□ 1.92
CSNK1E-204ENST00000403904 ODF3BA8MYP8 253 aa27.07■■□□□ 1.92
CSNK1E-204ENST00000403904 IGLV1-47P01700 117 aa27.07■■□□□ 1.92
CSNK1E-204ENST00000403904 H1FOOQ8IZA3 346 aaPredicted RBP27.07■■□□□ 1.92
CSNK1E-204ENST00000403904 J3QRK9 145 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 PRRX1P54821 245 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 Q3ZCU0 254 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 STEAP1BQ6NZ63 245 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 PIP4P2Q8N4L2 257 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 OR2AK2Q8NG84 335 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 OR4D10Q8NGI6 311 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 TINAGL1Q9GZM7 467 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 TOLLIPQ9H0E2 274 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 NUP50Q9UKX7 468 aa27.06■■□□□ 1.92
CSNK1E-204ENST00000403904 NPFFO15130 113 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 HNF1AP20823 631 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 DYRK1AQ13627 763 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 ACTBL2Q562R1 376 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 LY6G6FQ5SQ64 297 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 TRIQKQ629K1 86 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 SLC25A48Q6ZT89 311 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 TEX29Q8N6K0 151 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 BEND2Q8NDZ0 799 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 ZNF596Q8TC21 504 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 C11orf54Q9H0W9 315 aaPredicted RBP27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 MMP28Q9H239 520 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 CD74P04233 296 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 IL7P13232 177 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 CD40LGP29965 261 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 FCGR2CP31995 323 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 HLA-DRB5Q30154 266 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 RNASE10Q5GAN6 216 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 TOMM5Q8N4H5 51 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 C8orf31Q8N9H6 132 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 OR4P4Q8NGL7 312 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 ABHD14AQ9BUJ0 271 aa27.05■■□□□ 1.92
CSNK1E-204ENST00000403904 NSD1Q96L73 2696 aaPredicted RBP27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 INAFM1C9JVW0 142 aa27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 TBPP20226 339 aa27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 SRP14P37108 136 aaKnown RBP27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 FAAP20Q6NZ36 180 aa27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 EDARADDQ8WWZ3 215 aa27.04■■□□□ 1.92
CSNK1E-204ENST00000403904 ST8SIA5O15466 376 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 RAB3DO95716 219 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 SAA4P35542 130 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 LGALS4P56470 323 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 VAX1Q5SQQ9 334 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 LDLRAD2Q5SZI1 272 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 LHFPL4Q7Z7J7 247 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 LINC00311Q8N616 119 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 OR10X1Q8NGY0 326 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 TSC22D3Q99576 134 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 CCDC32Q9BV29 185 aa27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 SOX21Q9Y651 276 aaPredicted RBP27.03■■□□□ 1.92
CSNK1E-204ENST00000403904 MTORP42345 2549 aa27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 NAV3Q8IVL0 2385 aa27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 AKAIN1P0CW23 69 aa27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 KLF9Q13886 244 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 MIDNQ504T8 468 aa27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 ZNF57Q68EA5 555 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 BEX2Q9BXY8 128 aa27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 TEP1Q99973 2627 aaKnown RBP27.02■■□□□ 1.92
CSNK1E-204ENST00000403904 TUSC2O75896 110 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 INPP1P49441 399 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 TSPAN5P62079 268 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 OR4C16Q8NGL9 310 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 C17orf50Q8WW18 174 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 C22orf15Q8WYQ4 148 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 AGMATQ9BSE5 352 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 OR2W1Q9Y3N9 320 aa27.01■■□□□ 1.92
CSNK1E-204ENST00000403904 BUB1B-PAK6H3BSN5 160 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 IFNA6P05013 189 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 OR8U9P0C7N5 309 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 AADACP22760 399 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 ZNF660Q6AZW8 331 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 DHRS11Q6UWP2 260 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 OR8U1Q8NH10 309 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 GIMAP1Q8WWP7 306 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 ZNF2Q9BSG1 426 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 MS4A7Q9GZW8 240 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 RNF150Q9ULK6 438 aa27.01■■□□□ 1.91
CSNK1E-204ENST00000403904 ITGB1BP1O14713 200 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 EPHA1P21709 976 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 HTR1DP28221 377 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 AP3S2P59780 193 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 LDLRAD3Q86YD5 345 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 BCL6BQ8N143 479 aaPredicted RBP27■■□□□ 1.91
CSNK1E-204ENST00000403904 LYG1Q8N1E2 194 aa27■■□□□ 1.91
CSNK1E-204ENST00000403904 OR6F1Q8NGZ6 308 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms