RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CA11O75493 328 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 ARL6IP5O75915 188 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 BPNT1O95861 308 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 GAPDHP04406 335 aaKnown RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 GLAP06280 429 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 FAM106CPP0CH98 169 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 CD37P11049 281 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 ARSBP15848 533 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 IL3RAP26951 378 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 BLVRBP30043 206 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR10A3P58181 314 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 EMX1Q04741 257 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB11BQ15907 218 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 KHDC1LQ5JSQ8 128 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 HES5Q5TA89 166 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 SLC25A48Q6ZT89 311 aaKnown RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF367Q7RTV3 350 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 CENPVQ7Z7K6 275 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF329Q86UD4 541 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 NDUFA11Q86Y39 141 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 C5orf56Q8N8D9 126 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 C8orf31Q8N9H6 132 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 DTX3Q8N9I9 347 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR51D1Q8NGF3 324 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 SETD6Q8TBK2 473 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 ST6GALNAC6Q969X2 333 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 EAF1Q96JC9 268 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 TM2D1Q9BX74 207 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 PARP12Q9H0J9 701 aaKnown RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 LPAR5Q9H1C0 372 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 CHMP1AQ9HD42 196 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR2S2Q9NQN1 319 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 KCNIP1Q9NZI2 227 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 AK3Q9UIJ7 227 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 BLOC1S6Q9UL45 172 aa4.57□□□□□ -1.68
HMGB1P20-201ENST00000402555 TMEM272A0A1B0GTI8 110 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 TCRBV4S1A1TA0A5B7 111 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 NCBP2LA6PVI3 153 aaKnown RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 FOXI3A8MTJ6 420 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 SERPINE3A8MV23 424 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 M0QZK8 103 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 NAPSAO96009 420 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 PRB2P02812 416 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OPN1MWP04001 364 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OPN1MW2P0DN77 364 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OPN1MW3P0DN78 364 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 PSMA1P25786 263 aaKnown RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 PSMB9P28065 219 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR3A3P47888 321 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 VEGFCP49767 419 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 TMEM50BP56557 158 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 GABARAPL2P60520 117 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 CD83Q01151 205 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 TRAM1Q15629 374 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 HMGN3Q15651 99 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 C2orf76Q3KRA6 126 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 Q3ZCU0 254 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 MORN2Q502X0 79 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 PDLIM3Q53GG5 364 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 TRAT1Q6PIZ9 186 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR2W3Q7Z3T1 314 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 TGIF2LXQ8IUE1 241 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 IZUMO1Q8IYV9 350 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 Q8N6K4 173 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 OR2T10Q8NGZ9 312 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 IL1F10Q8WWZ1 152 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 FAM3DQ96BQ1 224 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 ARHGAP5-AS1Q96IT6 56 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 URM1Q9BTM9 101 aaKnown RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 ABHD14AQ9BUJ0 271 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 MRPL20Q9BYC9 149 aaKnown RBP4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 RAB9BQ9NP90 201 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 PLEKHJ1Q9NW61 149 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 NDUFB11Q9NX14 153 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 JPT1Q9UK76 154 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 V9GY05 133 aa4.56□□□□□ -1.68
HMGB1P20-201ENST00000402555 A0A075B6Q4 140 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 TRDV1A0A1B0GX56 115 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 PSMB11A5LHX3 300 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 DBX1A6NMT0 343 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 LDLRAD4O15165 306 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 FGF16O43320 207 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 DENRO43583 198 aaKnown RBP4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 LANCL1O43813 399 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 YPEL1O60688 119 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 MOSP00540 346 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 SLC2A2P11168 524 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 CNTFRP26992 372 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 CD1BP29016 333 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 GPR12P47775 334 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 ZNF137PP52743 207 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 F2RL1P55085 397 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 HTD2P86397 168 aa4.55□□□□□ -1.68
HMGB1P20-201ENST00000402555 LSAMPQ13449 338 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms