RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 MRPS28Q9Y2Q9 187 aaKnown RBP9.19□□□□□ -0.94
LINC00544-201ENST00000400540 RPL36Q9Y3U8 105 aaKnown RBP9.19□□□□□ -0.94
LINC00544-201ENST00000400540 PEX16Q9Y5Y5 336 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 A3GALT2U3KPV4 340 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 SAA2-SAA4A0A096LPE2 208 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 TRBV5-5A0A0J9YX44 114 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 A0A1W2PPK0 400 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 CIB2O75838 187 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SC5DO75845 299 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 NDUFA3O95167 84 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SAA2P0DJI9 122 aaPredicted RBP9.18□□□□□ -0.94
LINC00544-201ENST00000400540 RASSF2P50749 326 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 LRRC36Q1X8D7 754 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 CCDC58Q4VC31 144 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SIGIRRQ6IA17 410 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 LIN54Q6MZP7 749 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 ZNF833PQ6ZTB9 187 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 FRAS1Q86XX4 4008 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 JAGN1Q8N5M9 183 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 ZFP41Q8N8Y5 198 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 NPBQ8NG41 125 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 OR6Q1Q8NGQ2 317 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 MRPL30Q8TCC3 161 aaKnown RBP9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SMIM19Q96E16 107 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SLC29A1Q99808 456 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 SELENOIQ9C0D9 397 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
LINC00544-201ENST00000400540 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
LINC00544-201ENST00000400540 MBNL3Q9NUK0 354 aaKnown RBP9.18□□□□□ -0.94
LINC00544-201ENST00000400540 LOC100130705A0A1B0GUX0 176 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 OGG1O15527 345 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 WBP4O75554 376 aaKnown RBP9.17□□□□□ -0.94
LINC00544-201ENST00000400540 IGHV4-30-4P0DP06 118 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 EGR2P11161 476 aaPredicted RBP9.17□□□□□ -0.94
LINC00544-201ENST00000400540 MGMTP16455 207 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 RPS11P62280 158 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC00544-201ENST00000400540 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 AWAT2Q6E213 333 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 TRAT1Q6PIZ9 186 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 FAM131AQ6UXB0 335 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 FAM103A1Q9BTL3 118 aaKnown RBP9.17□□□□□ -0.94
LINC00544-201ENST00000400540 RAB9BQ9NP90 201 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 KIAA1456Q9P272 454 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 JPT1Q9UK76 154 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 GAB2Q9UQC2 676 aa9.17□□□□□ -0.94
LINC00544-201ENST00000400540 FOXA2Q9Y261 457 aaPredicted RBP9.17□□□□□ -0.94
LINC00544-201ENST00000400540 FCN1O00602 326 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 GPX5O75715 221 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 CRTAPO75718 401 aaPredicted RBP9.16□□□□□ -0.94
LINC00544-201ENST00000400540 MAS1P04201 325 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 OR8U9P0C7N5 309 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 FSTP19883 344 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 CRIP2P52943 208 aaPredicted RBP9.16□□□□□ -0.94
LINC00544-201ENST00000400540 PITPNAQ00169 270 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 GPR176Q14439 515 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 GLDNQ6ZMI3 551 aaPredicted RBP9.16□□□□□ -0.94
LINC00544-201ENST00000400540 Q8N1Y9 231 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 ABHD5Q8WTS1 349 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 GHSRQ92847 366 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 FAM46BQ96A09 425 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 MRPS24Q96EL2 167 aaKnown RBP9.16□□□□□ -0.94
LINC00544-201ENST00000400540 PGLYRP3Q96LB9 341 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 Q96M66 194 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 RDH12Q96NR8 316 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 MS4A10Q96PG2 267 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 OR14A2Q96R54 314 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 CST11Q9H112 138 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 GHITMQ9H3K2 345 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 CLEC2DQ9UHP7 191 aa9.16□□□□□ -0.94
LINC00544-201ENST00000400540 TRBV5-7A0A0A0MS05 114 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 PNMA8CA0A1B0GUJ8 204 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 YPEL1O60688 119 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 ATP5HO75947 161 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 BAG2O95816 211 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 FUT3P21217 361 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 CX3CL1P78423 397 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 HTD2P86397 168 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 Q499Y3 187 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 RPL39P5Q59GN2 51 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 C6orf141Q5SZD1 244 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 DMKNQ6E0U4 476 aaPredicted RBP9.15□□□□□ -0.94
LINC00544-201ENST00000400540 TMPRSS11AQ6ZMR5 421 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 LYPD6Q86Y78 171 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 ISOC1Q96CN7 298 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 YPEL2Q96QA6 119 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 CLCC1Q96S66 551 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 RSRP1Q9BUV0 290 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 PARP12Q9H0J9 701 aaKnown RBP9.15□□□□□ -0.94
LINC00544-201ENST00000400540 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 KCNIP1Q9NZI2 227 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 CKLFQ9UBR5 152 aa9.15□□□□□ -0.94
LINC00544-201ENST00000400540 FAM90A7PA6NKC0 464 aa9.14□□□□□ -0.95
LINC00544-201ENST00000400540 FAM90A23PA8MXZ1 464 aa9.14□□□□□ -0.95
LINC00544-201ENST00000400540 RRHO14718 337 aa9.14□□□□□ -0.95
LINC00544-201ENST00000400540 PDCD6O75340 191 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms