RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MARS2Q96GW9 593 aaKnown RBP15.69■□□□□ 0.1
COL18A1-204ENST00000400337 SRD5A3Q9H8P0 318 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 IGKV3-7A0A075B6H7 116 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 C19orf57Q0VDD7 668 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM171Q8WVE6 324 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 CHRNA10Q9GZZ6 450 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 PRO1933Q9H354 126 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 LOC101059948A0A1B0GTJ6 334 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 CTXND1A0A1B0GTU2 59 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 AP4M1O00189 453 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 PITX3O75364 302 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 PRF1P14222 555 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 IL22RA2Q969J5 263 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM208Q9BTX3 173 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 WNT5BQ9H1J7 359 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF880Q6PDB4 577 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 ANAPC16Q96DE5 110 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 VPS25Q9BRG1 176 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 ALPK2Q86TB3 2170 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 H0Y980 276 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM255AQ5JRV8 349 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 OR8G5Q8NG78 346 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 MS4A7Q9GZW8 240 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM222Q9H0R3 208 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 H3BQ15 152 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 NHLH1Q02575 133 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 UBE2V2Q15819 145 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 ANKRD55Q3KP44 614 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 WDR31Q8NA23 367 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 DIRC2Q96SL1 478 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 ARID2Q68CP9 1835 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 ECSCRQ19T08 205 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 DOLPP1Q86YN1 238 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 PERPQ96FX8 193 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 CRYBA2P53672 197 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 AICDAQ9GZX7 198 aa15.68■□□□□ 0.1
COL18A1-204ENST00000400337 LNP1A1A4G5 178 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 GFRA3O60609 400 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 IGHMP01871 453 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 USF1P22415 310 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-204ENST00000400337 NCMAPQ5T1S8 102 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 C19orf35Q6ZS72 473 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 MRPL30Q8TCC3 161 aaKnown RBP15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM222BQ8WU58 562 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 DLL3Q9NYJ7 618 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM229AB2RXF0 380 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 TGFBR3LH3BV60 316 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 CXorf1O96002 111 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 CD1BP29016 333 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 WNT5AP41221 380 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 P2RY4P51582 365 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 OR1L1Q8NH94 360 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 AKIRIN1Q9H9L7 192 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-204ENST00000400337 AURKAIP1Q9NWT8 199 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-204ENST00000400337 PIKFYVEQ9Y2I7 2098 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 OR5AL1P0C617 328 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 CTSSP25774 331 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM252Q8N6L7 170 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 GPHA2Q96T91 129 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A10PA6NDY2 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A18PA6NE21 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A16PA6NEW6 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 HELTA6NFD8 242 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A20PA6NIJ5 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A8PA6NJQ4 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A7PA6NKC0 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A22PA8MWA6 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A12PA8MX19 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A5PA8MXJ8 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A23PA8MXZ1 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 MFNGO00587 321 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 DEDDO75618 318 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A15PP0C7V4 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A13PP0C7W8 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A14PP0C7W9 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 FAM90A24PP0C7X0 464 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 SLC16A13Q7RTY0 426 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 OR5R1Q8NH85 324 aa15.67■□□□□ 0.1
COL18A1-204ENST00000400337 IGHV3-72A0A0B4J1Y9 119 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 TEX50A0A1B0GTY4 177 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 SRSF10O75494 262 aaKnown RBP15.66■□□□□ 0.1
COL18A1-204ENST00000400337 CSN3P07498 182 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 C5orf17Q8NAS9 161 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 PRDM14Q9GZV8 571 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 PDE6DO43924 150 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 RAMP1O60894 148 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 P01737 135 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 RFPL3SP0C7P2 107 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 COL8A1P27658 744 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM183BQ1AE95 376 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 KLF14Q8TD94 323 aaPredicted RBP15.66■□□□□ 0.1
COL18A1-204ENST00000400337 NPAS1Q99742 590 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 PKIBQ9C010 78 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 UFC1Q9Y3C8 167 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 B4DEV8 164 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 KLF4O43474 513 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 CRISP2P16562 243 aa15.66■□□□□ 0.1
COL18A1-204ENST00000400337 CCDC144NLQ6NUI1 221 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms