RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PSG6Q00889 435 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 SNRNP40Q96DI7 357 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 GPR35Q9HC97 309 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 E5RGE8 158 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 IGSF11Q5DX21 431 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 PDFQ9HBH1 243 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 PDE6DO43924 150 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 KISS1Q15726 138 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 SLC23A3Q6PIS1 610 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 MSRB3Q8IXL7 192 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 SH2D2AQ9NP31 389 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 NKX2-6A6NCS4 301 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 ZNHIT1O43257 154 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 WISP3O95389 354 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 EGR1P18146 543 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 CSF2RBP32927 897 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 CRYBB2P43320 205 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 LFNGQ8NES3 379 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 AHCTF1Q8WYP5 2266 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 B4DEV8 164 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 IGHA2P01877 340 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 GZMBP10144 247 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 RPL12P30050 165 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 DGCR2P98153 550 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SLC38A11Q08AI6 406 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SP6Q3SY56 376 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 RNF167Q9H6Y7 350 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 C5orf67F2Z3F1 127 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 EPPINO95925 133 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SRSF7Q16629 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 GPR137Q96N19 417 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 CELA2AP08217 269 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 C10orf113Q5VZT2 155 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 STAC2Q6ZMT1 411 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 LRRC75AQ8NAA5 344 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 ST6GALNAC3Q8NDV1 305 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SMIM4Q8WVI0 70 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 PLEKHA2Q9HB19 425 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 IGLV3-27P01718 113 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 NPBWR2P48146 333 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 SCAND1P57086 179 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 STHQ8IWL8 128 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
CACNA1C-216ENST00000399638 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 HMSDA8MTL9 139 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 K7N7A8 449 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 TRGV3P03979 118 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 LIMS3P0CW19 117 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 LIMS4P0CW20 117 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 GNLYP22749 145 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 SLC6A1P30531 599 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 FAM89BQ8N5H3 189 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 HDHD3Q9BSH5 251 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 WDR54Q9H977 334 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 KCNE3Q9Y6H6 103 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 IFNL4K9M1U5 179 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 NUBPLQ8TB37 319 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 CNRIP1Q96F85 164 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 SSBP3Q9BWW4 388 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 CORTO00230 105 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 PAGE4O60829 102 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 TSPOP30536 169 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 PMELP40967 661 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 ZNF362Q5T0B9 420 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 STPG3Q8N7X2 389 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 ZNF737O75373 536 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 CTLA4P16410 223 aa9.56□□□□□ -0.88
CACNA1C-216ENST00000399638 PRDX2P32119 198 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms