RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 CD74P04233 296 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CYB5R2Q6BCY4 276 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 PLEKHB1Q9UF11 243 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CXorf51AA0A1B0GTR3 108 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 GDF9O60383 454 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 SELENOPP49908 381 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 SLC37A1P57057 533 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 UBE2L3P68036 154 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CDK5R1Q15078 307 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 MYEOVQ96EZ4 313 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 LINC00470Q9BZP3 86 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 TRBV5-3A0A0A0MS03 114 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 SLC17A2O00624 439 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 PTHLHP12272 177 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 HIST3H3Q16695 136 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CLDN14O95500 239 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 CDKN1AP38936 164 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 OR4X1Q8NH49 305 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 NPFFO15130 113 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 FAM24BQ8N5W8 94 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 ZDHHC22Q8N966 263 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 V9GYH0 126 aa9.59□□□□□ -0.87
CACNA1C-210ENST00000399606 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 CTSVO60911 334 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 HINT1P49773 126 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 AESQ08117 197 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 A0A0A6YYD5 115 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 IGHV1-69-2A0A0G2JMI3 117 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 APCSP02743 223 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 COX6CP09669 75 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 CISD3P0C7P0 127 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 PNLIPP16233 465 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 OR10J1P30954 320 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 PSG6Q00889 435 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 GLDNQ6ZMI3 551 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 OR5C1Q8NGR4 320 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 SNRNP40Q96DI7 357 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 GPR35Q9HC97 309 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 A0A087X0M5 115 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 TRAV1-2A0A0B4J238 106 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 A0A1B0GX30 115 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 LINC00303Q3SY05 128 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 SP6Q3SY56 376 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 IGSF11Q5DX21 431 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 PDE6DO43924 150 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 KISS1Q15726 138 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 SLC23A3Q6PIS1 610 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 MSRB3Q8IXL7 192 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 SCMH1Q96GD3 660 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 ZFP30Q9Y2G7 519 aa9.58□□□□□ -0.88
CACNA1C-210ENST00000399606 NKX2-6A6NCS4 301 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 ZNHIT1O43257 154 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 WISP3O95389 354 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 SFT2D2O95562 160 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 EGR1P18146 543 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 CRYBB2P43320 205 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 ANGPTL4Q9BY76 406 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 B4DEV8 164 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 GZMBP10144 247 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 C5orf67F2Z3F1 127 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 EPPINO95925 133 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 DYNLT3P51808 116 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 SRSF7Q16629 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 TMEM272A0A1B0GTI8 110 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 CELA2AP08217 269 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 HLA-DRB3P79483 266 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 C10orf113Q5VZT2 155 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 LRRC75AQ8NAA5 344 aa9.57□□□□□ -0.88
CACNA1C-210ENST00000399606 ST6GALNAC3Q8NDV1 305 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms