RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 OR2W1Q9Y3N9 320 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 TRAV39A0A0B4J263 110 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 K7ESF4 209 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 GDF9O60383 454 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM3BP58499 235 aaPredicted RBP11.89□□□□□ -0.51
APOB-202ENST00000399256 RAC1P63000 192 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 ACTL10Q5JWF8 245 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
APOB-202ENST00000399256 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
APOB-202ENST00000399256 CPEB3Q8NE35 698 aaKnown RBP11.89□□□□□ -0.51
APOB-202ENST00000399256 TAF15Q92804 592 aaKnown RBP eCLIP11.89□□□□□ -0.51
APOB-202ENST00000399256 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 OR1A1Q9P1Q5 309 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 ARHGAP21Q5T5U3 1957 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A10PA6NDY2 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A7PA6NKC0 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A23PA8MXZ1 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 B4E171 279 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 SCGB1D1O95968 90 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 FGF5P12034 268 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 TSPAN7P41732 249 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 PDLIM4P50479 330 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 PCOLCEQ15113 449 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
APOB-202ENST00000399256 ZDHHC23Q8IYP9 409 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 TRAPPC2LH3BP13 241 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 SYNGR1O43759 233 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 CXCL13O43927 109 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 PSMB3P49720 205 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 ZXDAP98168 799 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
APOB-202ENST00000399256 PINX1Q96BK5 328 aaKnown RBP11.89□□□□□ -0.51
APOB-202ENST00000399256 GYPAP02724 150 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 SLC25A6P12236 298 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 CXCL12P48061 93 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 SLC38A11Q08AI6 406 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 HLA-BQ31612 363 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 Q8NFD4 153 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 PDGFBP01127 241 aaPredicted RBP11.88□□□□□ -0.51
APOB-202ENST00000399256 CARD18P57730 90 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
APOB-202ENST00000399256 SF3B5Q9BWJ5 86 aaKnown RBP11.88□□□□□ -0.51
APOB-202ENST00000399256 CEP192Q8TEP8 1941 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 CHRNA7P36544 502 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 RAC3P60763 192 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 GPR35Q9HC97 309 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 KIAA1549Q9HCM3 1950 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 COX5BP10606 129 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 PCBD1P61457 104 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 ACSF3Q4G176 576 aaPredicted RBP11.87□□□□□ -0.51
APOB-202ENST00000399256 GUSBP11Q6P575 273 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 CADM4Q8NFZ8 388 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 PSMF1Q92530 271 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 SPSB4Q96A44 273 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 C1QTNF5Q9BXJ0 243 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
APOB-202ENST00000399256 AURKAIP1Q9NWT8 199 aaPredicted RBP11.87□□□□□ -0.51
APOB-202ENST00000399256 RBM7Q9Y580 266 aaKnown RBP11.87□□□□□ -0.51
APOB-202ENST00000399256 A0A0G2JMM0 328 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 A0A1W2PPB8 328 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 A0A1W2PRS3 328 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 KIR3DP1A8MWS1 328 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 MKXQ8IYA7 352 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 MUC3AQ02505 3323 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 CLDN1O95832 211 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 DEFA4P12838 97 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 SSR4P51571 173 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 ACOT6Q3I5F7 207 aaPredicted RBP11.86□□□□□ -0.51
APOB-202ENST00000399256 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 SGCZQ96LD1 299 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 M0R143 59 aa11.86□□□□□ -0.51
APOB-202ENST00000399256 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms