RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 YPEL1O60688 119 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IGKV1D-33P01593 117 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IGKV1-33P01594 117 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SCTP09683 121 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 STEAP3Q658P3 488 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MOB1BQ7L9L4 216 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C16orf82Q7Z2V1 217 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 AKR1E2Q96JD6 320 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 YPEL2Q96QA6 119 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ABHD14AQ9BUJ0 271 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 PARP12Q9H0J9 701 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 Q9N2K0 584 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB1-202ENST00000399079 METTL21EPA6NDL7 271 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 LPLP06858 475 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TMEM11P17152 192 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IL3RAP26951 378 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF137PP52743 207 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 HLA-DRB3P79483 266 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 LGALS14Q8TCE9 139 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 PTX4Q96A99 478 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 YIPF6Q96EC8 236 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR1A1Q9P1Q5 309 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MFNGO00587 321 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 AIREO43918 545 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CD3GP09693 182 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR3A3P47888 321 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 ZNF230Q9UIE0 474 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB1-202ENST00000399079 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IGKV1-6A0A0C4DH72 117 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 RGS11O94810 467 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 CEACAM6P40199 344 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 VDAC2P45880 294 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 TIMM50Q3ZCQ8 353 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C9orf152Q5JTZ5 239 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IDNKQ5T6J7 187 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 C11orf88Q6PI97 169 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 DTX3Q8N9I9 347 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 OR5H6Q8NGV6 325 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 EAF1Q96JC9 268 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 MOB4Q9Y3A3 225 aa11.21□□□□□ -0.61
HLA-DQB1-202ENST00000399079 SAA2-SAA4A0A096LPE2 208 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TRDCB7Z8K6 153 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 HSPA12AO43301 675 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 PEX14O75381 377 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FCGR3AP08637 254 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 EBI3Q14213 229 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 HERPUD1Q15011 391 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CDNFQ49AH0 187 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 WNT10AQ9GZT5 417 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 MGAT4AQ9UM21 535 aa11.2□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SERPINE3A8MV23 424 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TXNL1O43396 289 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LANCL1O43813 399 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SMIM18P0DKX4 95 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CD28P10747 220 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ZBTB25P24278 435 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CD1BP29016 333 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RPS19P39019 145 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ARFRP1Q13795 201 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 IGSF11Q5DX21 431 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 IZUMO1Q8IYV9 350 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 Q8N6K4 173 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 C5orf56Q8N8D9 126 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 WIPF2Q8TF74 440 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FUNDC2Q9BWH2 189 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 C11orf54Q9H0W9 315 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 IGKV1D-8A0A087WSZ0 117 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 M0QZK8 103 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FABP7O15540 132 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LSAMPQ13449 338 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms